RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CD80P33681 288 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 QRFPP83859 136 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 INSM1Q01101 510 aaPredicted RBP17.63■□□□□ 0.41
SDF4-205ENST00000465727 GLO1Q04760 184 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 UNC119Q13432 240 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 ACKR1Q16570 336 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 RD3Q7Z3Z2 195 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 ELSPBP1Q96BH3 223 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 CMBLQ96DG6 245 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 WDR92Q96MX6 357 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 LAT2Q9GZY6 243 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 G6PC2Q9NQR9 355 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 OR52A1Q9UKL2 312 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 ANAPC10Q9UM13 185 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 POM121BA6NF01 834 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 C11orf98E9PRG8 122 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 CRABP1P29762 137 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 GJA4P35212 333 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 FABP9Q0Z7S8 132 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 CLEC18BQ6UXF7 455 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 KDM8Q8N371 416 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 SLC22A24Q8N4F4 322 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 ARHGEF39Q8N4T4 335 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 LYPD6BQ8NI32 183 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 C2orf50Q96LR7 162 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 TXNIPQ9H3M7 391 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 PRTFDC1Q9NRG1 225 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 MIOXQ9UGB7 285 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 K7EQS6 105 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 IL33O95760 270 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 IGHV2-70P01814 119 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 PMP2P02689 132 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 CBR1P16152 277 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 CXCR1P25024 350 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 STARD6P59095 220 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 HGFACQ04756 655 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 DEGS2Q6QHC5 323 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 ZNF600Q6ZNG1 722 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 NUBPLQ8TB37 319 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 ZC3H10Q96K80 434 aaKnown RBP17.62■□□□□ 0.41
SDF4-205ENST00000465727 C5orf66Q9H5L9 145 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 MEMO1Q9Y316 297 aa17.62■□□□□ 0.41
SDF4-205ENST00000465727 CST4P01036 141 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 IGHV2-5P01817 119 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 CHRM2P08172 466 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 CTLA4P16410 223 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 ZNF14P17017 642 aaPredicted RBP17.61■□□□□ 0.41
SDF4-205ENST00000465727 GLP1RP43220 463 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 C1orf53Q5VUE5 145 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 COMMD1Q8N668 190 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 TCTEX1D2Q8WW35 142 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 TMEM230Q96A57 120 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 FOXN4Q96NZ1 517 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 SLC26A1Q9H2B4 701 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 RPS10P5Q9NQ39 176 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 OBP2AQ9NY56 170 aa17.61■□□□□ 0.41
SDF4-205ENST00000465727 RPH3AQ9Y2J0 694 aaPredicted RBP17.61■□□□□ 0.41
SDF4-205ENST00000465727 WRBO00258 174 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 IGHMP01871 453 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 GAPDHP04406 335 aaKnown RBP17.6■□□□□ 0.41
SDF4-205ENST00000465727 VSIG8P0DPA2 414 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 GNB3P16520 340 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 FPR2P25090 351 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 OTPQ5XKR4 325 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 ZNF775Q96BV0 537 aaPredicted RBP17.6■□□□□ 0.41
SDF4-205ENST00000465727 HRASLS2Q9NWW9 162 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 ADAP1O75689 374 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 APODP05090 189 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 SERPINA5P05154 406 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 GSTP1P09211 210 aaKnown RBP17.6■□□□□ 0.41
SDF4-205ENST00000465727 GALNSP34059 522 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 IL15RAQ13261 267 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 RUNX3Q13761 415 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 PEG10Q86TG7 708 aaKnown RBP17.6■□□□□ 0.41
SDF4-205ENST00000465727 OOSP2Q86WS3 158 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 ANGPTL5Q86XS5 388 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 POC1AQ8NBT0 407 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 SPPL3Q8TCT6 385 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 ROBO4Q8WZ75 1007 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 TSACCQ96A04 125 aaPredicted RBP17.6■□□□□ 0.41
SDF4-205ENST00000465727 MALSU1Q96EH3 234 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 TMEM41AQ96HV5 264 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 AKR1E2Q96JD6 320 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 MAP3K3Q99759 626 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 NAA11Q9BSU3 229 aaPredicted RBP17.6■□□□□ 0.41
SDF4-205ENST00000465727 DZANK1Q9NVP4 752 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 GHRLQ9UBU3 117 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 CLDN16Q9Y5I7 305 aa17.6■□□□□ 0.41
SDF4-205ENST00000465727 UTS2O95399 124 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 NME2P22392 152 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 CTNNB1P35222 781 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 RAB32Q13637 225 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 TMEM268Q5VZI3 342 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 RPL7L1Q6DKI1 246 aaKnown RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 FAM160A2Q8N612 972 aaPredicted RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 TRIM43Q96BQ3 446 aaPredicted RBP17.59■□□□□ 0.41
SDF4-205ENST00000465727 ZNF524Q96C55 264 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 OCSTAMPQ9BR26 566 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 SLC5A6Q9Y289 635 aa17.59■□□□□ 0.41
SDF4-205ENST00000465727 LAMA2P24043 3122 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms