RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SRP9P49458 86 aaKnown RBP8.09□□□□□ -1.11
USP39-212ENST00000465514 GNB2P62879 340 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 KCNMB1Q16558 191 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 FAM201AQ5SY85 155 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 GPR139Q6DWJ6 353 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 ZNF620Q6ZNG0 422 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 LIAT1Q6ZQX7 453 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 PTCHD4Q6ZW05 846 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 CBLL1Q75N03 491 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 TSEN54Q7Z6J9 526 aaKnown RBP8.09□□□□□ -1.11
USP39-212ENST00000465514 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.09□□□□□ -1.11
USP39-212ENST00000465514 MOGAT3Q86VF5 341 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 CYP4Z1Q86W10 505 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 BHLHE23Q8NDY6 225 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 SLC7A13Q8TCU3 470 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 APOBEC3DQ96AK3 386 aaPredicted RBP8.09□□□□□ -1.11
USP39-212ENST00000465514 UPRTQ96BW1 309 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 NEIL1Q96FI4 390 aaPredicted RBP8.09□□□□□ -1.11
USP39-212ENST00000465514 PLEKHA8Q96JA3 519 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 TMEM246Q9BRR3 403 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 NUAK2Q9H093 628 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 ANKRD19PQ9H560 264 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 VIPAS39Q9H9C1 493 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 NRIP3Q9NQ35 241 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 ATPIF1Q9UII2 106 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 SIGLEC7Q9Y286 467 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 POLR1DQ9Y2S0 133 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 IER3IP1Q9Y5U9 82 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 CAPN7Q9Y6W3 813 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 SACSQ9NZJ4 4579 aa8.09□□□□□ -1.11
USP39-212ENST00000465514 STAB2Q8WWQ8 2551 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 KIR2DS1A0A191URI9 304 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 LRRC30A6NM36 301 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 IQCF6A8MYZ5 107 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 NME4O00746 187 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 H1F0P07305 194 aaKnown RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 MELTFP08582 738 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 PMELP40967 661 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 CDKN2AP42771 156 aaKnown RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 RPL15P61313 204 aaKnown RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 HIST1H3AP68431 136 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 DBPQ10586 325 aaPredicted RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 MEP1BQ16820 701 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 ZNF181Q2M3W8 571 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 RSPO1Q2MKA7 263 aaPredicted RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 ZNF404Q494X3 552 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 HIST2H3PS2Q5TEC6 136 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 CORO6Q6QEF8 472 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 Q6YL49 198 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 HIST2H3AQ71DI3 136 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 ARPINQ7Z6K5 226 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 ADCK1Q86TW2 530 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 TMEM86BQ8N661 226 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 GJC3Q8NFK1 279 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 OR8B3Q8NGG8 313 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 OR10S1Q8NGN2 331 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 DACT3Q96B18 629 aaPredicted RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 PHF21AQ96BD5 680 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 RSRC1Q96IZ7 334 aaKnown RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 TSSK2Q96PF2 358 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 OR8B2Q96RD0 313 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 GPX7Q96SL4 187 aaPredicted RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 COQ7Q99807 217 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 NUDT16L1Q9BRJ7 211 aaKnown RBP8.08□□□□□ -1.12
USP39-212ENST00000465514 HDHD2Q9H0R4 259 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 WDR76Q9H967 626 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 TMEM100Q9NV29 134 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 LHFPL6Q9Y693 200 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 ENPP4Q9Y6X5 453 aa8.08□□□□□ -1.12
USP39-212ENST00000465514 A0A1B0GWJ7 208 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 A0A1W2PRQ8 180 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 UNC119BA6NIH7 251 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 DCTN6O00399 190 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 SLC22A2O15244 555 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 GPR37O15354 613 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 GPR137BO60478 399 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 FSTL3O95633 263 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 TXNDC12O95881 172 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 HLA-DPB1P04440 258 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 COX4I1P13073 169 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 NCK1P16333 377 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 FPR3P25089 353 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 OMPP47874 163 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 PITPNBP48739 271 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 GSK3BP49841 420 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 RPS6KA3P51812 740 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 SLC7A2P52569 658 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 FXYD6P3P58550 94 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 DGCR6Q14129 220 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 SEC23BQ15437 767 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 FGD3Q5JSP0 725 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 LYPD2Q6UXB3 125 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 DPY19L2P2Q6ZN68 376 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 NLRC3Q7RTR2 1065 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 C1orf87Q8N0U7 546 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 RP9Q8TA86 221 aaKnown RBP8.07□□□□□ -1.12
USP39-212ENST00000465514 DYRK2Q92630 601 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 FAM162AQ96A26 154 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 LYSTQ99698 3801 aa8.07□□□□□ -1.12
USP39-212ENST00000465514 HOPXQ9BPY8 73 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms