RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CAMK2DQ13557 499 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 ETFDHQ16134 617 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 BCL2A1Q16548 175 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 WIPI1Q5MNZ9 446 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-215ENST00000465457 C10orf128Q5T292 105 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 ABLIM2Q6H8Q1 611 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 SLC25A47Q6Q0C1 308 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 LUZP2Q86TE4 346 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 PARP16Q8N5Y8 322 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 ZNF676Q8N7Q3 588 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 C9orf106Q8NAJ2 232 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 OR6N1Q8NGY5 312 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 TMEM54Q969K7 222 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 ADGRG7Q96K78 797 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 EMC6Q9BV81 110 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 MOB1AQ9H8S9 216 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 ELOVL3Q9HB03 270 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 SLCO1C1Q9NYB5 712 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 GLTPQ9NZD2 209 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 PRR14LQ5THK1 2151 aa12.11□□□□□ -0.47
HDAC6-215ENST00000465457 TRBV5-5A0A0J9YX44 114 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 OR4C45A6NMZ5 311 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 NOTOA8MTQ0 251 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 ZNF814B7Z6K7 855 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 CTDSP2O14595 271 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 GPR171O14626 319 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 SMAD9O15198 467 aaKnown RBP12.1□□□□□ -0.47
HDAC6-215ENST00000465457 MAGEB4O15481 346 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-215ENST00000465457 GOSR1O95249 250 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 IL2RAP01589 272 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 PTH2RP49190 550 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 PSMD7P51665 324 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 DEFA1P59665 94 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 DEFA3P59666 94 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 NANOS3P60323 173 aaKnown RBP12.1□□□□□ -0.47
HDAC6-215ENST00000465457 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
HDAC6-215ENST00000465457 SFXN4Q6P4A7 337 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 FOXL2NBQ6ZUU3 175 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-215ENST00000465457 MEIOBQ8N635 442 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 ST7LQ8TDW4 575 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 CHPT1Q8WUD6 406 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 RNF133Q8WVZ7 376 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 C11orf40Q8WZ69 217 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 PIGTQ969N2 578 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 MCHR2Q969V1 340 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 RNF166Q96A37 237 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-215ENST00000465457 MAP6Q96JE9 813 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 DERL3Q96Q80 235 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 OR2M2Q96R28 347 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 OR14A2Q96R54 314 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 TRIB1Q96RU8 372 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 ATF6BQ99941 703 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 PDCD1LG2Q9BQ51 273 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 RBM24Q9BX46 236 aaKnown RBP12.1□□□□□ -0.47
HDAC6-215ENST00000465457 C1orf198Q9H425 327 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 B3GAT2Q9NPZ5 323 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 FRRS1LQ9P0K9 344 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 ABRACLQ9P1F3 81 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 RABL2AQ9UBK7 228 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-215ENST00000465457 CYB5R1Q9UHQ9 305 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 RABL2BQ9UNT1 228 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 POLR1DQ9Y2S0 133 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 R4GMQ9 66 aa12.1□□□□□ -0.47
HDAC6-215ENST00000465457 A0A1W2PPL8 197 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 PHF1O43189 567 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-215ENST00000465457 SLC43A1O75387 559 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 GPANK1O95872 356 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 ACTL6AO96019 429 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 F12P00748 615 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-215ENST00000465457 QDPRP09417 244 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 H2BFMP0C1H6 154 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 ZNF84P51523 738 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 INSL4Q14641 139 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 NSUN5P2Q63ZY6 315 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 KLHL24Q6TFL4 600 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 LRRN1Q6UXK5 716 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 ZNF704Q6ZNC4 412 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-215ENST00000465457 DCXRQ7Z4W1 244 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 LRRC28Q86X40 367 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-215ENST00000465457 LAX1Q8IWV1 398 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 TMEM123Q8N131 208 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 GDPD1Q8N9F7 314 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 OR10D3Q8NH80 312 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 CMTM3Q96MX0 182 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 SRXN1Q9BYN0 137 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 ZCCHC4Q9H5U6 513 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 ABCB9Q9NP78 766 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 ACKR4Q9NPB9 350 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 LRP12Q9Y561 859 aa12.09□□□□□ -0.47
HDAC6-215ENST00000465457 SHISA3A0PJX4 238 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 MBD3L3A6NE82 208 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-215ENST00000465457 OR6C65A6NJZ3 312 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 AHRRA9YTQ3 701 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 ZNF878C9JN71 531 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 PSMD9O00233 223 aa12.08□□□□□ -0.48
HDAC6-215ENST00000465457 CYTIPO60759 359 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms