RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SNX33Q8WV41 574 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 REPIN1Q9BWE0 567 aaKnown RBP15.06■□□□□ 0
CPSF4-209ENST00000465132 BCL2L14Q9BZR8 327 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 CISD1Q9NZ45 108 aaKnown RBP15.06■□□□□ 0
CPSF4-209ENST00000465132 NPAP1Q9NZP6 1156 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 CHD3Q12873 2000 aaKnown RBP15.05■□□□□ 0
CPSF4-209ENST00000465132 ZNF503-AS2A6NEH8 195 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 SHISA9B4DS77 424 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 CD5LO43866 347 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 NDUFS7O75251 213 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 SULT1C4O75897 302 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 CCNOP22674 350 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 APEX1P27695 318 aaKnown RBP15.05■□□□□ -0
CPSF4-209ENST00000465132 DCTDP32321 178 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 ROM1Q03395 351 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 MRPL28Q13084 256 aaKnown RBP15.05■□□□□ -0
CPSF4-209ENST00000465132 ZNF322Q6U7Q0 402 aaPredicted RBP15.05■□□□□ -0
CPSF4-209ENST00000465132 LYPD4Q6UWN0 246 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 DRAM2Q6UX65 266 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 B3GLCTQ6Y288 498 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 CFAP77Q6ZQR2 320 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 DTX2Q86UW9 622 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 ZNF679Q8IYX0 411 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 STX19Q8N4C7 294 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 ZNF540Q8NDQ6 660 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 CPEB3Q8NE35 698 aaKnown RBP15.05■□□□□ -0
CPSF4-209ENST00000465132 LGALS12Q96DT0 336 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 TMEM80Q96HE8 168 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 POM121L2Q96KW2 1035 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 ZNF75AQ96N20 296 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 KCNJ15Q99712 375 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 BARX1Q9HBU1 254 aaPredicted RBP15.05■□□□□ -0
CPSF4-209ENST00000465132 FGF20Q9NP95 211 aaPredicted RBP15.05■□□□□ -0
CPSF4-209ENST00000465132 FAIMQ9NVQ4 179 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 FBXO9Q9UK97 447 aaPredicted RBP15.05■□□□□ -0
CPSF4-209ENST00000465132 EXOSC1Q9Y3B2 195 aaKnown RBP15.05■□□□□ -0
CPSF4-209ENST00000465132 RTTNQ86VV8 2226 aa15.05■□□□□ -0
CPSF4-209ENST00000465132 ACOD1A6NK06 481 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 ICMTO60725 284 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 ABHD16AO95870 558 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 RPSAP08865 295 aaKnown RBP15.04■□□□□ -0
CPSF4-209ENST00000465132 RIDAP52758 137 aaKnown RBP15.04■□□□□ -0
CPSF4-209ENST00000465132 SELENOVP59797 346 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 ZNF829Q3KNS6 432 aaPredicted RBP15.04■□□□□ -0
CPSF4-209ENST00000465132 TMPRSS11AQ6ZMR5 421 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 ZNF584Q8IVC4 421 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 NUP37Q8NFH4 326 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 MAP6Q96JE9 813 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 JAM3Q9BX67 310 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 AMBNQ9NP70 447 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 YAE1D1Q9NRH1 226 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 TBCCD1Q9NVR7 557 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 IKZF2Q9UKS7 526 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 LRRC42Q9Y546 428 aa15.04■□□□□ -0
CPSF4-209ENST00000465132 IGHV2OR16-5A0A0B4J2B6 119 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 SLC1A7O00341 560 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 ZNF35P13682 527 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 MALLQ13021 153 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 SMN1Q16637 294 aaKnown RBP15.03■□□□□ -0
CPSF4-209ENST00000465132 ZNF786Q8N393 782 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 ITFG2Q969R8 447 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 APOBEC3DQ96AK3 386 aaPredicted RBP15.03■□□□□ -0
CPSF4-209ENST00000465132 MS4A3Q96HJ5 214 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 C4orf45Q96LM5 186 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 OR8B4Q96RC9 309 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 NOX3Q9HBY0 568 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 PSORS1C1Q9UIG5 152 aa15.03■□□□□ -0
CPSF4-209ENST00000465132 DIMT1Q9UNQ2 313 aaKnown RBP15.03■□□□□ -0
CPSF4-209ENST00000465132 CADP27708 2225 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 CR1P17927 2039 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 A0A1W2PQL4 384 aaPredicted RBP15.02■□□□□ -0
CPSF4-209ENST00000465132 METTL15A6NJ78 407 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 F5H5K5 113 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 H3BSA7 217 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 M0R135 149 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 IGHA1P01876 353 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 NR4A1P22736 598 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 OPRL1P41146 370 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 RPS27P42677 84 aaKnown RBP15.02■□□□□ -0
CPSF4-209ENST00000465132 SLC6A9P48067 706 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 ST3GAL4Q11206 333 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 MOGQ16653 247 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 SYS1Q8N2H4 156 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 ZNF283Q8N7M2 679 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 OR52H1Q8NGJ2 320 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 OR52I1Q8NGK6 324 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 ZNF799Q96GE5 643 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 OPA3Q9H6K4 179 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 MOB1AQ9H8S9 216 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 PNRC2Q9NPJ4 139 aaKnown RBP15.02■□□□□ -0
CPSF4-209ENST00000465132 AASSQ9UDR5 926 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 GPR160Q9UJ42 338 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 ZNF391Q9UJN7 358 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 GRIP1Q9Y3R0 1128 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 ATP23Q9Y6H3 246 aa15.02■□□□□ -0
CPSF4-209ENST00000465132 ABCA1O95477 2261 aa15.02□□□□□ -0.01
CPSF4-209ENST00000465132 LOC100509620A0A075B734 347 aa15.01□□□□□ -0.01
CPSF4-209ENST00000465132 J3QRE1 110 aa15.01□□□□□ -0.01
CPSF4-209ENST00000465132 SSX4O60224 188 aa15.01□□□□□ -0.01
CPSF4-209ENST00000465132 MRPS14O60783 128 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms