RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 DOCK10Q96BY6 2186 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 PPIAL4EA0A075B759 164 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 IGHV1-45A0A0A0MS14 117 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 NSG1A0A0A6YYJ2 146 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 A0A1W2PQ72 361 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SMCO3A2RU48 225 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 TUBAL3A6NHL2 446 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SMIM23A6NLE4 172 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SRRM4A7MD48 611 aaKnown RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 A8MT66 165 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 TEX46H3BTG2 121 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 WWP2O00308 870 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 TXNDC9O14530 226 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 ERI3O43414 337 aaKnown RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 TSPAN2O60636 221 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 H6PDO95479 791 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 ETHE1O95571 254 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 HPP00738 406 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SERPINA6P08185 405 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SNRPAP09012 282 aaKnown RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 PPIAL4FP0DN26 164 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 NEFHP12036 1026 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 GP1BBP13224 206 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 GFAPP14136 432 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 POU2F1P14859 743 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SLCO1A2P46721 670 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 UQCRFS1P47985 274 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 RAB11AP62491 216 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 RPS4XP62701 263 aaKnown RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 BTN3A2P78410 334 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 IRF8Q02556 426 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 MFGE8Q08431 387 aaPredicted RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 ASPHQ12797 758 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 ABRAXAS2Q15018 415 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 RAB11BQ15907 218 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 EXT1Q16394 746 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 MICBQ29980 383 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 ZNF829Q3KNS6 432 aaPredicted RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 SFT2D3Q587I9 215 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 CDKL4Q5MAI5 379 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 TCHHL1Q5QJ38 904 aaPredicted RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 LIPNQ5VXI9 398 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 RFPL4BQ6ZWI9 263 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 CCDC80Q76M96 950 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 TRMT10CQ7L0Y3 403 aaKnown RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 ASRGL1Q7L266 308 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 NDUFAF7Q7L592 441 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SSX9Q7RTT3 188 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 KIF2BQ8N4N8 673 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 TMEM178AQ8NBL3 297 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 OR51G2Q8NGK0 314 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 OR4D5Q8NGN0 318 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 CLHC1Q8NHS4 586 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 RHEBL1Q8TAI7 183 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 GPR148Q8TDV2 347 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 DOK4Q8TEW6 326 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 PHLDA1Q8WV24 401 aaPredicted RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 GTF3AQ92664 365 aaKnown RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 C10orf35Q96D05 121 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 OMA1Q96E52 524 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 WDR34Q96EX3 536 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 PELI1Q96FA3 418 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 IMMP1LQ96LU5 166 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 HBEGFQ99075 208 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 MAPKAP1Q9BPZ7 522 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 KCNS3Q9BQ31 491 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 C20orf24Q9BUV8 137 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 OR51B5Q9H339 312 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 NT5DC2Q9H857 520 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 MTHFD2LQ9H903 347 aaPredicted RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 NUDT15Q9NV35 164 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 MED17Q9NVC6 651 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 C14orf105Q9NVL8 296 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 AHSPQ9NZD4 102 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 PTTG3PQ9NZH4 202 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 TMEM216Q9P0N5 145 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 OPTCQ9UBM4 332 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 ZNF225Q9UK10 706 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 NXT1Q9UKK6 140 aaKnown RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 PCTPQ9UKL6 214 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SLC7A7Q9UM01 511 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 MEMO1Q9Y316 297 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 RNF11Q9Y3C5 154 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 RHBDD3Q9Y3P4 386 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 CSDC2Q9Y534 153 aaKnown RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 PPIAL4AQ9Y536 164 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 SCN2AQ99250 2005 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 HECTD1Q9ULT8 2610 aa3.47□□□□□ -1.85
UBR4-209ENST00000465036 USP9XQ93008 2570 aaPredicted RBP3.47□□□□□ -1.85
UBR4-209ENST00000465036 FLNBO75369 2602 aaKnown RBP3.46□□□□□ -1.86
UBR4-209ENST00000465036 CSMD1Q96PZ7 3565 aa3.46□□□□□ -1.86
UBR4-209ENST00000465036 NUP210LQ5VU65 1888 aa3.46□□□□□ -1.86
UBR4-209ENST00000465036 SETXQ7Z333 2677 aaKnown RBP3.46□□□□□ -1.86
UBR4-209ENST00000465036 CNTRLQ7Z7A1 2325 aa3.46□□□□□ -1.86
UBR4-209ENST00000465036 IGKV3D-11A0A0A0MRZ8 115 aa3.46□□□□□ -1.86
UBR4-209ENST00000465036 TRBV5-5A0A0J9YX44 114 aa3.46□□□□□ -1.86
UBR4-209ENST00000465036 A0A1W2PPV4 95 aa3.46□□□□□ -1.86
UBR4-209ENST00000465036 SYCE1LA8MT33 242 aa3.46□□□□□ -1.86
UBR4-209ENST00000465036 A8MVM7 634 aa3.46□□□□□ -1.86
UBR4-209ENST00000465036 G3V2L1 256 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms