RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 C7orf26Q96N11 449 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 COQ7Q99807 217 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 SMURF1Q9HCE7 757 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 COA3Q9Y2R0 106 aaPredicted RBP11.93□□□□□ -0.5
SMC1A-204ENST00000463684 NOP16Q9Y3C1 178 aaKnown RBP11.93□□□□□ -0.5
SMC1A-204ENST00000463684 KPTNQ9Y664 436 aa11.93□□□□□ -0.5
SMC1A-204ENST00000463684 KMT2CQ8NEZ4 4911 aaKnown RBP11.93□□□□□ -0.5
SMC1A-204ENST00000463684 DVL1O14640 695 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 OR10H3O60404 316 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 CD14P08571 375 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 EEF1B2P24534 225 aaKnown RBP11.92□□□□□ -0.5
SMC1A-204ENST00000463684 SLC9A3P48764 834 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 MALLQ13021 153 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 MESTQ5EB52 335 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 NRMQ8IXM6 262 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 SPERTQ8NA61 448 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 OR5R1Q8NH85 324 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 Q96M85 177 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 ZNF570Q96NI8 536 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 NDEL1Q9GZM8 345 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 SLC22A4Q9H015 551 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 HDHD2Q9H0R4 259 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 PPA2Q9H2U2 334 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 NECAP2Q9NVZ3 263 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 ADAM18Q9Y3Q7 739 aa11.92□□□□□ -0.5
SMC1A-204ENST00000463684 DOCK11Q5JSL3 2073 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 OOEPA6NGQ2 149 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 RNASEK-C17orf49H0YIS7 233 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 XPNPEP2O43895 674 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 PAHP00439 452 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 GYPAP02724 150 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 GZMMP51124 257 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 PRSS12P56730 875 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 MAGOHP61326 146 aaKnown RBP11.91□□□□□ -0.5
SMC1A-204ENST00000463684 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
SMC1A-204ENST00000463684 GUCA2AQ02747 115 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 PRKCDQ05655 676 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 FHL1Q13642 323 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 GK2Q14410 553 aaPredicted RBP11.91□□□□□ -0.5
SMC1A-204ENST00000463684 C11orf88Q6PI97 169 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 PGAP1Q75T13 922 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 CMTM4Q8IZR5 234 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 C11orf44Q8N8P7 122 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 PLPP7Q8NBV4 271 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 ST8SIA4Q92187 359 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 SLCO4A1Q96BD0 722 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 PRRC1Q96M27 445 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 SEMA6AQ9H2E6 1030 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 ONECUT1Q9UBC0 465 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 AURKCQ9UQB9 309 aa11.91□□□□□ -0.5
SMC1A-204ENST00000463684 GMDSO60547 372 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 CA6P23280 308 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 CENPAP49450 140 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 CYLC2Q14093 348 aaPredicted RBP11.9□□□□□ -0.5
SMC1A-204ENST00000463684 KCNMB1Q16558 191 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 ZBED5Q49AG3 693 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 OXLD1Q5BKU9 147 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 PGM2L1Q6PCE3 622 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 METAP1DQ6UB28 335 aaPredicted RBP11.9□□□□□ -0.5
SMC1A-204ENST00000463684 COLCA1Q6ZS62 124 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.9□□□□□ -0.5
SMC1A-204ENST00000463684 RNF113BQ8IZP6 322 aaKnown RBP11.9□□□□□ -0.5
SMC1A-204ENST00000463684 TPD52L3Q96J77 140 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 SH3GL1Q99961 368 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 FNDC11Q9BVV2 318 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 PARD6BQ9BYG5 372 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 SYT4Q9H2B2 425 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 NMNAT1Q9HAN9 279 aaPredicted RBP11.9□□□□□ -0.5
SMC1A-204ENST00000463684 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMC1A-204ENST00000463684 RPUSD1Q9UJJ7 312 aaKnown RBP11.9□□□□□ -0.5
SMC1A-204ENST00000463684 RPS6KA6Q9UK32 745 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 A4GNTQ9UNA3 340 aa11.9□□□□□ -0.5
SMC1A-204ENST00000463684 V9GYY5 206 aaPredicted RBP11.9□□□□□ -0.5
SMC1A-204ENST00000463684 TET2Q6N021 2002 aaPredicted RBP11.89□□□□□ -0.51
SMC1A-204ENST00000463684 F5H5K5 113 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 LCATP04180 440 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 KRR1Q13601 381 aaKnown RBP11.89□□□□□ -0.51
SMC1A-204ENST00000463684 TRAM2Q15035 370 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 NANOGP8Q6NSW7 305 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 C1orf122Q6ZSJ8 110 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 MRPL21Q7Z2W9 205 aaKnown RBP11.89□□□□□ -0.51
SMC1A-204ENST00000463684 FAM156AQ8NDB6 213 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 TSPEARQ8WU66 669 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 LZICQ8WZA0 190 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 ADAT1Q9BUB4 502 aaKnown RBP11.89□□□□□ -0.51
SMC1A-204ENST00000463684 AURKAIP1Q9NWT8 199 aaPredicted RBP11.89□□□□□ -0.51
SMC1A-204ENST00000463684 C1orf123Q9NWV4 160 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 RHCGQ9UBD6 479 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 FOXJ3Q9UPW0 622 aa11.89□□□□□ -0.51
SMC1A-204ENST00000463684 A0A1W2PRD5 423 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 A0A1W2PRF3 423 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 A0A1W2PRM7 423 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 NPFFO15130 113 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 ACSM4P0C7M7 580 aa11.88□□□□□ -0.51
SMC1A-204ENST00000463684 SDHAP31040 664 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms