RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 DNAJC9Q8WXX5 260 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 RAB39BQ96DA2 213 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 COPS4Q9BT78 406 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 ZNF665Q9H7R5 613 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 MED20Q9H944 212 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 CENPMQ9NSP4 180 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 KIF17Q9P2E2 1029 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 TMEFF2Q9UIK5 374 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-202ENST00000463440 FAM157AC9JC47 383 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 ZNF878C9JN71 531 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 PRR23D1E9PI22 279 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-202ENST00000463440 GLCEO94923 617 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 MSMBP08118 114 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 PRR23D2P0DMB1 279 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-202ENST00000463440 PSKH1P11801 424 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 SRD5A1P18405 259 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 GSTT1P30711 240 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 CDK5Q00535 292 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 GK2Q14410 553 aaPredicted RBP13.74□□□□□ -0.21
COL1A1-202ENST00000463440 SPRNQ5BIV9 151 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 LINC01590Q5TEZ4 76 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 C1orf146Q5VVC0 180 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 DRAM2Q6UX65 266 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 BHLHE23Q8NDY6 225 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 OR51F2Q8NH61 342 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 ITLN1Q8WWA0 313 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 SLAMF6Q96DU3 332 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 PLEKHA8Q96JA3 519 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 OR2V2Q96R30 315 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 INTS14Q96SY0 518 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 OR51V1Q9H2C8 321 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 NTN4Q9HB63 628 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 TMEM106BQ9NUM4 274 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 PPP1R3CQ9UQK1 317 aa13.74□□□□□ -0.21
COL1A1-202ENST00000463440 TANC2Q9HCD6 1990 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 ISPDA4D126 451 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 OTX1P32242 354 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-202ENST00000463440 SLC15A1P46059 708 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 SRP9P49458 86 aaKnown RBP13.73□□□□□ -0.21
COL1A1-202ENST00000463440 GRB2P62993 217 aaKnown RBP13.73□□□□□ -0.21
COL1A1-202ENST00000463440 EIF2B1Q14232 305 aaKnown RBP13.73□□□□□ -0.21
COL1A1-202ENST00000463440 IL17RELQ6ZVW7 336 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 PGAP1Q75T13 922 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 SHFQ7M4L6 423 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 MRPL21Q7Z2W9 205 aaKnown RBP13.73□□□□□ -0.21
COL1A1-202ENST00000463440 ERI1Q8IV48 349 aaKnown RBP13.73□□□□□ -0.21
COL1A1-202ENST00000463440 ZNF283Q8N7M2 679 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 OR6N2Q8NGY6 317 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 OR5K1Q8NHB7 308 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 ST7LQ8TDW4 575 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 UTP4Q969X6 686 aaKnown RBP13.73□□□□□ -0.21
COL1A1-202ENST00000463440 TMEM186Q96B77 213 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 KCNJ15Q99712 375 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 GAL3ST1Q99999 423 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 SLC30A2Q9BRI3 323 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 LPAR2Q9HBW0 351 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 PAPOLBQ9NRJ5 636 aaKnown RBP13.73□□□□□ -0.21
COL1A1-202ENST00000463440 TMEM100Q9NV29 134 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 NPTNQ9Y639 398 aa13.73□□□□□ -0.21
COL1A1-202ENST00000463440 IFNL4K9M1U5 179 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 CIB2O75838 187 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 PRKXP51817 358 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 ATP6AP1Q15904 470 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 PLBD1Q6P4A8 553 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 FAHD1Q6P587 224 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 DPY19L4Q7Z388 723 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 OR10AD1Q8NGE0 317 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 MARCH7Q9H992 704 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 SLC25A19Q9HC21 320 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 HIF1ANQ9NWT6 349 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 AP4S1Q9Y587 144 aa13.72□□□□□ -0.21
COL1A1-202ENST00000463440 DYSFO75923 2080 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 TRAV20A0A0B4J274 112 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 PRODHO43272 600 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 SBK2P0C263 348 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 FASP25445 335 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 CRISP1P54107 249 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 SNAI3Q3KNW1 292 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 KLHL12Q53G59 568 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 SPATC1Q76KD6 591 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 CPOQ8IVL8 374 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 TIGD4Q8IY51 512 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 PARP8Q8N3A8 854 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 SPRYD4Q8WW59 207 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-202ENST00000463440 ZMYND19Q96E35 227 aaPredicted RBP13.71□□□□□ -0.21
COL1A1-202ENST00000463440 MEGF10Q96KG7 1140 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 ABHD6Q9BV23 337 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 TOR3AQ9H497 397 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 SP140LQ9H930 580 aa13.71□□□□□ -0.21
COL1A1-202ENST00000463440 NOP16Q9Y3C1 178 aaKnown RBP13.71□□□□□ -0.21
COL1A1-202ENST00000463440 A0A1B0GWJ7 208 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 GGT3PA6NGU5 568 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 G3V2T6 193 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 H0YL77 283 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 MLNRO43193 412 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 XRCC2O43543 280 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 IGHV2-70P01814 119 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 APOC1P02654 83 aa13.7□□□□□ -0.22
COL1A1-202ENST00000463440 FCGR1AP12314 374 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms