RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 A0A1B0GVI7 797 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 GGT3PA6NGU5 568 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 HMX3A6NHT5 357 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 CYTIPO60759 359 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 SP1P08047 785 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 B4GALT1P15291 398 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 ARSBP15848 533 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 MEOX1P50221 254 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 HIST1H3AP68431 136 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 HIST2H3PS2Q5TEC6 136 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 HACD4Q5VWC8 232 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 HIST2H3AQ71DI3 136 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 TMPRSS7Q7RTY8 843 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 GJC3Q8NFK1 279 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 CREB3L1Q96BA8 519 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 LYZL4Q96KX0 146 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 DMRTB1Q96MA1 342 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 SPACA5Q96QH8 159 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 NIPAL2Q9H841 368 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 CNTD2Q9H8S5 307 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 PLEKHA1Q9HB21 404 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
VAPB-203ENST00000463370 CNOT1A5YKK6 2376 aaKnown RBP11.26□□□□□ -0.61
VAPB-203ENST00000463370 ARPC4-TTLL3A0A0A6YYG9 625 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 LOC390937A0A1W2PQ73 354 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 NME2P1O60361 137 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 KRT33AO76009 404 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 FCER2P06734 321 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 NME2P22392 152 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 SCAND1P57086 179 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 PLGLB1Q02325 96 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 SNTB2Q13425 540 aaKnown RBP11.26□□□□□ -0.61
VAPB-203ENST00000463370 OR6M1Q8NGM8 313 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 CPNE4Q96A23 557 aaPredicted RBP11.26□□□□□ -0.61
VAPB-203ENST00000463370 PNPLA2Q96AD5 504 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 INTS12Q96CB8 462 aaKnown RBP11.26□□□□□ -0.61
VAPB-203ENST00000463370 FYTTD1Q96QD9 318 aaKnown RBP11.26□□□□□ -0.61
VAPB-203ENST00000463370 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 B3GNT4Q9C0J1 378 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 MOB1AQ9H8S9 216 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 RANGRFQ9HD47 186 aaPredicted RBP11.26□□□□□ -0.61
VAPB-203ENST00000463370 B4GALT7Q9UBV7 327 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 LIPGQ9Y5X9 500 aa11.26□□□□□ -0.61
VAPB-203ENST00000463370 TRAV18A0A075B6X5 111 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 LDLRAD4O15165 306 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 TCRBP04435 133 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 MNDAP41218 407 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 ZNF84P51523 738 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 NUBP1P53384 320 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 GRB2P62993 217 aaKnown RBP11.25□□□□□ -0.61
VAPB-203ENST00000463370 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
VAPB-203ENST00000463370 MOGAT2Q3SYC2 334 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 FAM27BQ5VT28 67 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 SFRP4Q6FHJ7 346 aaPredicted RBP11.25□□□□□ -0.61
VAPB-203ENST00000463370 SLC25A25Q6KCM7 469 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 ZNF529Q6P280 563 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.25□□□□□ -0.61
VAPB-203ENST00000463370 OR1M1Q8NGA1 313 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 FGFBP3Q8TAT2 258 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 FCAMRQ8WWV6 532 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 ATG5Q9H1Y0 275 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 HRASLSQ9HDD0 168 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 DCHS1Q96JQ0 3298 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 MEIS3P1A6NDR6 274 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 SULT1B1O43704 296 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 LRP3O75074 770 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 ZNF708P17019 499 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 CTSSP25774 331 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 BDKRB2P30411 391 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 SLC6A9P48067 706 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 DYRK1AQ13627 763 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 RNFT1Q5M7Z0 435 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 ELFN2Q5R3F8 820 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 C1orf100Q5SVJ3 147 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 SFRP5Q5T4F7 317 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 DNM1P46Q6ZS02 220 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 CACNG6Q9BXT2 260 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 DPAGT1Q9H3H5 408 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 ZNF552Q9H707 407 aaPredicted RBP11.25□□□□□ -0.61
VAPB-203ENST00000463370 TMEM38BQ9NVV0 291 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 ZNF221Q9UK13 617 aa11.25□□□□□ -0.61
VAPB-203ENST00000463370 ELF5Q9UKW6 265 aaPredicted RBP11.25□□□□□ -0.61
VAPB-203ENST00000463370 RIF1Q5UIP0 2472 aaKnown RBP11.24□□□□□ -0.61
VAPB-203ENST00000463370 A0A0A6YYJ9 748 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 HLA-DMAP28067 261 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 PPIAP62937 165 aaKnown RBP11.24□□□□□ -0.61
VAPB-203ENST00000463370 CD83Q01151 205 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 HGFACQ04756 655 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 KCNJ8Q15842 424 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 CEACAM16Q2WEN9 425 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 OR5AS1Q8N127 324 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 GPR137CQ8N3F9 429 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 FNDC9Q8TBE3 224 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 ITFG2Q969R8 447 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 RNF170Q96K19 258 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 ZMAT3Q9HA38 289 aaKnown RBP11.24□□□□□ -0.61
VAPB-203ENST00000463370 ANKRD20A5PA0PJZ0 165 aa11.24□□□□□ -0.61
VAPB-203ENST00000463370 MEGF11A6BM72 1044 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms