RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 NKX6-3A6NJ46 265 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CCL3P10147 92 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CSRP1P21291 193 aaKnown RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 ZNF81P51508 661 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 ERVK-16P61578 105 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 IL13RA1P78552 427 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 BEND4Q6ZU67 534 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 BOLLQ8N9W6 283 aaKnown RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 DNAAF1Q8NEP3 725 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 FGF11Q92914 225 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CRLF2Q9HC73 371 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 UNC13CQ8NB66 2214 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 A0A0G2JMP0 313 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 NXPH2O95156 264 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 EPPINO95925 133 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 IFNA5P01569 189 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 RAB6AP20340 208 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 PTGS2P35354 604 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 HCCSP53701 268 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 SNU13P55769 128 aaKnown RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 RPL19P84098 196 aaKnown RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 PCOLCEQ15113 449 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 GRK1Q15835 563 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CORO6Q6QEF8 472 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 ZNF695Q8IW36 515 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 ZDHHC23Q8IYP9 409 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 ASCC1Q8N9N2 400 aaKnown RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 OR4M2Q8NGB6 313 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 MTCL1Q9Y4B5 1905 aaKnown RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 SPAARA0A1B0GVQ0 90 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 A0A1W2PPH5 198 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 PRSS44E7EML9 344 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CLDN12P56749 244 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 TAS2R20P59543 309 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CDC20Q12834 499 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 TATDN3Q17R31 274 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 GSG1Q2KHT4 349 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 LYPD4Q6UWN0 246 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 NKX3-1Q99801 234 aaPredicted RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 BARHL1Q9BZE3 327 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CYSLTR2Q9NS75 346 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 NPIPB9F8W1W9 429 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 TCRBP04435 133 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 ELK1P19419 428 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 AKR1C2P52895 323 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 RPP30P78346 268 aaKnown RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 MRPS34P82930 218 aaKnown RBP10.51□□□□□ -0.73
RBM39-223ENST00000463004 OR8G1Q15617 311 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 MSMO1Q15800 293 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 MESTQ5EB52 335 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 NRARPQ7Z6K4 114 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CCDC190Q86UF4 302 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 ZNF709Q8N972 641 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 SCGB1C1Q8TD33 95 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 CHST6Q9GZX3 395 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 NECAP2Q9NVZ3 263 aa10.51□□□□□ -0.73
RBM39-223ENST00000463004 PTPRZ1P23471 2315 aaPredicted RBP10.5□□□□□ -0.73
RBM39-223ENST00000463004 LNP1A1A4G5 178 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 SERPINE3A8MV23 424 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 PRR33A8MZF0 331 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 GPR137BO60478 399 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 PAHP00439 452 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 TFP02787 698 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 B4GALT1P15291 398 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 CTLA4P16410 223 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 RFX2P48378 723 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 ARF1P84077 181 aaKnown RBP10.5□□□□□ -0.73
RBM39-223ENST00000463004 BCL2A1Q16548 175 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 GFRALQ6UXV0 394 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 CDH26Q8IXH8 852 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 ZNF687Q8N1G0 1237 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 FAM71CQ8NEG0 241 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 FAM83FQ8NEG4 500 aaPredicted RBP10.5□□□□□ -0.73
RBM39-223ENST00000463004 OR2T35Q8NGX2 323 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 AMDHD2Q9Y303 409 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 A0A1W2PNV4 684 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 hCG_1809904A0A1W2PP81 198 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 A0A1W2PPE2 198 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 A0A1W2PR64 198 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 A0A1W2PRV1 198 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 DHRS3O75911 302 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 COX6A1P12074 109 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 HLA-DMAP28067 261 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 FOXB2Q5VYV0 432 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 C16orf47Q6ZP98 133 aaPredicted RBP10.5□□□□□ -0.73
RBM39-223ENST00000463004 C1orf87Q8N0U7 546 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 TMEM105Q8N8V8 129 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 PTP4A1Q93096 173 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 SLIRPQ9GZT3 109 aaKnown RBP10.5□□□□□ -0.73
RBM39-223ENST00000463004 UBQLN2Q9UHD9 624 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 XRCC3O43542 346 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 GLAP06280 429 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 SOX18P35713 384 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 MFGE8Q08431 387 aaPredicted RBP10.5□□□□□ -0.73
RBM39-223ENST00000463004 IDO2Q6ZQW0 420 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 SIAH3Q8IW03 269 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 LRRC20Q8TCA0 184 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 PIGTQ969N2 578 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 IGHV3-15A0A0B4J1V0 119 aa10.5□□□□□ -0.73
RBM39-223ENST00000463004 C5orf49A4QMS7 147 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms