RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 UTP4Q969X6 686 aaKnown RBP13.06□□□□□ -0.32
VARS-219ENST00000461328 SLAMF6Q96DU3 332 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 C1orf159Q96HA4 380 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 ZNF582Q96NG8 517 aaPredicted RBP13.06□□□□□ -0.32
VARS-219ENST00000461328 C1QTNF5Q9BXJ0 243 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 NTN4Q9HB63 628 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 CACNG2Q9Y698 323 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 ISPDA4D126 451 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 RNF212BA8MTL3 300 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 B4DSR2 109 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 ZNF878C9JN71 531 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 G3V2T6 193 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 SURF4O15260 269 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 GLCEO94923 617 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 CD55P08174 381 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 ADH4P08319 380 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 SELEP16581 610 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 PRKXP51817 358 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 DVL1P1P54792 670 aaPredicted RBP13.05□□□□□ -0.32
VARS-219ENST00000461328 SLC3A1Q07837 685 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 KRTAP27-1Q3LI81 207 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 TMEM236Q5W0B7 351 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 AMIGO2Q86SJ2 522 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 GLCCI1Q86VQ1 547 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 ZDHHC13Q8IUH4 622 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 OR10S1Q8NGN2 331 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 ZMYND19Q96E35 227 aaPredicted RBP13.05□□□□□ -0.32
VARS-219ENST00000461328 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 SLC25A19Q9HC21 320 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 KRT84Q9NSB2 600 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 DDX28Q9NUL7 540 aaKnown RBP13.05□□□□□ -0.32
VARS-219ENST00000461328 TMEFF2Q9UIK5 374 aaPredicted RBP13.05□□□□□ -0.32
VARS-219ENST00000461328 N6AMT1Q9Y5N5 214 aa13.05□□□□□ -0.32
VARS-219ENST00000461328 FBN1P35555 2871 aaKnown RBP13.05□□□□□ -0.32
VARS-219ENST00000461328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.05□□□□□ -0.323e-7■■■□□ 18.3
VARS-219ENST00000461328 ATRQ13535 2644 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 TNFRSF1AP19438 455 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 PCMT1P22061 227 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 HSD11B1P28845 292 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 SLC15A1P46059 708 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 DAPP51397 102 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 CRISP1P54107 249 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 PRSS12P56730 875 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 CDK5Q00535 292 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 CDK5R2Q13319 367 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 SNAPC1Q16533 368 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 RSPO1Q2MKA7 263 aaPredicted RBP13.04□□□□□ -0.32
VARS-219ENST00000461328 TEX30Q5JUR7 227 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 LINC01590Q5TEZ4 76 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 FAHD1Q6P587 224 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 DRAM2Q6UX65 266 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 Q6ZR03 302 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 COLCA1Q6ZS62 124 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 PGAP1Q75T13 922 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 ZNF771Q7L3S4 317 aaPredicted RBP13.04□□□□□ -0.32
VARS-219ENST00000461328 DPY19L4Q7Z388 723 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 PEG10Q86TG7 708 aaKnown RBP13.04□□□□□ -0.32
VARS-219ENST00000461328 NAA40Q86UY6 237 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 CPOQ8IVL8 374 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 ZNF283Q8N7M2 679 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 OR8G5Q8NG78 346 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 OR10AD1Q8NGE0 317 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 RAB1CQ92928 201 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 LPAR2Q9HBW0 351 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 TVP23BQ9NYZ1 205 aa13.04□□□□□ -0.32
VARS-219ENST00000461328 FAM157AC9JC47 383 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 PHF1O43189 567 aaPredicted RBP13.03□□□□□ -0.32
VARS-219ENST00000461328 PRODHO43272 600 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 MSMBP08118 114 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 SRP14P37108 136 aaKnown RBP13.03□□□□□ -0.32
VARS-219ENST00000461328 GRB2P62993 217 aaKnown RBP13.03□□□□□ -0.32
VARS-219ENST00000461328 GK2Q14410 553 aaPredicted RBP13.03□□□□□ -0.32
VARS-219ENST00000461328 PCK2Q16822 640 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 ASRGL1Q7L266 308 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 SHFQ7M4L6 423 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 PARP8Q8N3A8 854 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 OR13G1Q8NGZ3 307 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 ST7LQ8TDW4 575 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 SPRYD4Q8WW59 207 aaPredicted RBP13.03□□□□□ -0.32
VARS-219ENST00000461328 ITLN1Q8WWA0 313 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 LRTOMTQ8WZ04 291 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 OR2V2Q96R30 315 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 KCNJ15Q99712 375 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 GAL3ST1Q99999 423 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 WIPI2Q9Y4P8 454 aa13.03□□□□□ -0.32
VARS-219ENST00000461328 IQCF6A8MYZ5 107 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 EBAG9O00559 213 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 TBX1O43435 398 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 SELENOFO60613 162 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 MITFO75030 526 aaPredicted RBP13.02□□□□□ -0.33
VARS-219ENST00000461328 ANXA2P07355 339 aaKnown RBP13.02□□□□□ -0.33
VARS-219ENST00000461328 SLC2A1P11166 492 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 NAA10P41227 235 aaPredicted RBP13.02□□□□□ -0.33
VARS-219ENST00000461328 CX3CR1P49238 355 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 RAD23AP54725 363 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 LMO4P61968 165 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 ESRRGP62508 458 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 SNAI3Q3KNW1 292 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 SPRNQ5BIV9 151 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 SLC35D3Q5M8T2 416 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms