RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 IGHEP01854 428 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 RNF224P0DH78 156 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NPIPA8P0DM63 369 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ACP2P11117 423 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 MMP9P14780 707 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 CD36P16671 472 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 GALP22466 123 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SOAT1P35610 550 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SOX3P41225 446 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 TSFMP43897 325 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 RFX3P48380 749 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SRP9P49458 86 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 RBP2P50120 134 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 EMDP50402 254 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 UCNP55089 124 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 TRA2BP62995 288 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 HBA1P69905 142 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 HSF2Q03933 536 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 FAM27E3Q08E93 113 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 AQP6Q13520 282 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 HEPACAMQ14CZ8 416 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 INPP5JQ15735 1006 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 MAPK11Q15759 364 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 GUCA2BQ16661 112 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 HFEQ30201 348 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 VPS26BQ4G0F5 336 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 AGKQ53H12 422 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 OR2B11Q5JQS5 317 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 PAGE3Q5JUK9 113 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 CPTPQ5TA50 214 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 XAF1Q6GPH4 301 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 RAB12Q6IQ22 244 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC25A24Q6NUK1 477 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 DEGS2Q6QHC5 323 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ZBTB49Q6ZSB9 765 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 RNF165Q6ZSG1 346 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ASB18Q6ZVZ8 466 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 EIF3MQ7L2H7 374 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SHFQ7M4L6 423 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 PIWIL3Q7Z3Z3 882 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 P4HA3Q7Z4N8 544 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 DCXRQ7Z4W1 244 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 RPS19BP1Q86WX3 136 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 MSRB3Q8IXL7 192 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 OR8H3Q8N146 312 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 C10orf111Q8N326 155 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 LRRC25Q8N386 305 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 C9orf62Q8N4C0 152 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 DHRSXQ8N5I4 330 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 CLEC1AQ8NC01 280 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 OR14A16Q8NHC5 309 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 C16orf52Q8NHV5 167 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 MCFD2Q8NI22 146 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 C9orf43Q8TAL5 461 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 DTD1Q8TEA8 209 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 RAB8BQ92930 207 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 TNFRSF14Q92956 283 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF300Q96RE9 604 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 PFDN5Q99471 154 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 KLHDC3Q9BQ90 382 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 FUNDC2Q9BWH2 189 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 FAIM2Q9BWQ8 316 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 DEFB126Q9BYW3 111 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 DPY30Q9C005 99 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NPFFR1Q9GZQ6 430 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SLIRPQ9GZT3 109 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NAA50Q9GZZ1 169 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 HDHD2Q9H0R4 259 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NXF5Q9H1B4 397 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 OPN3Q9H1Y3 402 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF385DQ9H6B1 395 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 IL1RL2Q9HB29 575 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NIT2Q9NQR4 276 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SDHAF2Q9NX18 166 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 MS4A12Q9NXJ0 267 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 MED11Q9P086 117 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 CCDC167Q9P0B6 97 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ERVK-18Q9QC07 812 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 C19orf25Q9UFG5 118 aaPredicted RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF639Q9UID6 485 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SSR3Q9UNL2 185 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ING4Q9UNL4 249 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NTNG1Q9Y2I2 539 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 KCNIP3Q9Y2W7 256 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 SHANK1Q9Y566 2161 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF780BQ9Y6R6 833 aa4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 NIPBLQ6KC79 2804 aaeCLIP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 DIDO1Q9BTC0 2240 aaKnown RBP4.25□□□□□ -1.73
ATPAF1-203ENST00000460928 HIVEP1P15822 2718 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 NBEAL1Q6ZS30 2694 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A1B0GV90 55 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A1W2PRB8 838 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF99A8MXY4 864 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 B4DXG7 233 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 AIPO00170 330 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ACOT8O14734 319 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 GMFGO60234 142 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SELENOFO60613 162 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ZFAND5O76080 213 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms