RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 MED12Q93074 2177 aa7.06□□□□□ -1.28
SFPQ-202ENST00000460428 NCOA6Q14686 2063 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 PHF3Q92576 2039 aaKnown RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 EP300Q09472 2414 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 A0A0B4J203 849 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 LOC100289279A0A1B0GTE1 492 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 M0R135 149 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 SGCEO43556 437 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 SS18L1O75177 396 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 CNOT4O95628 575 aaKnown RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ERCC1P07992 297 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 FCGR2AP12318 317 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 GABRA1P14867 456 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 SPNP16150 400 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ZNF32P17041 273 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 RAB6AP20340 208 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 AZGP1P25311 298 aaKnown RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 HTR2CP28335 458 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 BDKRB2P30411 391 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 EIF2S3P41091 472 aaKnown RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ALDH3B1P43353 468 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 PTH2RP49190 550 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 PRKXP51817 358 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 TPTEP56180 551 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 PSG4Q00888 419 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 GUSBP1Q15486 140 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ODF4Q2M2E3 257 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 C2orf76Q3KRA6 126 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 SLC36A2Q495M3 483 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 TRIQKQ629K1 86 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ANKRD16Q6P6B7 361 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 COLCA1Q6ZS62 124 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 UTS2BQ765I0 119 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 SKA3Q8IX90 412 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ZNF283Q8N7M2 679 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 DNAAF1Q8NEP3 725 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 OR1M1Q8NGA1 313 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 OR51A2Q8NGJ7 313 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 OR1J2Q8NGS2 313 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 SYNPRQ8TBG9 265 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 OR51E1Q8TCB6 317 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 SMIM4Q8WVI0 70 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 RFT1Q96AA3 541 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 FAM3DQ96BQ1 224 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ZNF775Q96BV0 537 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 FGGYQ96C11 551 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ADAT3Q96EY9 351 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 ZNF799Q96GE5 643 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 GMPPAQ96IJ6 420 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 NUDT16L1Q9BRJ7 211 aaKnown RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 OR2H1Q9GZK4 316 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 C11orf54Q9H0W9 315 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 DEFB127Q9H1M4 99 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 RGCCQ9H4X1 137 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 LDAHQ9H6V9 325 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 METTL17Q9H7H0 456 aaPredicted RBP7.05□□□□□ -1.28
SFPQ-202ENST00000460428 TMEM138Q9NPI0 162 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 GPR84Q9NQS5 396 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 RHBDL2Q9NX52 303 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 PLEK2Q9NYT0 353 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 NPAP1Q9NZP6 1156 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 CLCF1Q9UBD9 225 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 MALT1Q9UDY8 824 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 GTF2A1LQ9UNN4 478 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 SLC5A6Q9Y289 635 aa7.05□□□□□ -1.28
SFPQ-202ENST00000460428 CIB4A0PJX0 185 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 OR14I1A6ND48 311 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 SLC22A20A6NK97 555 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 ZNF587BE7ETH6 402 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 E9PLN8 166 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 GABARAPH6UMI1 98 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 TFECO14948 347 aaPredicted RBP7.04□□□□□ -1.28
SFPQ-202ENST00000460428 LYRM1O43325 122 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 PFDN1O60925 122 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 DHRS3O75911 302 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 FARS2O95363 451 aaKnown RBP7.04□□□□□ -1.28
SFPQ-202ENST00000460428 TGM6O95932 706 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 ADRB1P08588 477 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 PRF1P14222 555 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 ZNF24P17028 368 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 RAB3AP20336 220 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 ANOS1P23352 680 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 AGTR1P30556 359 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 THBS4P35443 961 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 KIR2DL3P43628 341 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 MAP2K3P46734 347 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 OR3A2P47893 321 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 POU3F4P49335 361 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 GSK3AP49840 483 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 CLDN12P56749 244 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 QRFPP83859 136 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 SRYQ05066 204 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 DYRK1AQ13627 763 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 ZNF169Q14929 603 aaPredicted RBP7.04□□□□□ -1.28
SFPQ-202ENST00000460428 RAB11BQ15907 218 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 ZBTB37Q5TC79 503 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 MZT2BQ6NZ67 158 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 FAM57BQ71RH2 274 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 CHMP1BQ7LBR1 199 aa7.04□□□□□ -1.28
SFPQ-202ENST00000460428 SLC16A14Q7RTX9 510 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms