RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 PCNPQ8WW12 178 aaKnown RBP5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 MARC2Q969Z3 335 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 ZNF524Q96C55 264 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 LMF1Q96S06 567 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 KCNK17Q96T54 332 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 SMAD5Q99717 465 aaKnown RBP5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 CMKLR1Q99788 373 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 SLC6A7Q99884 636 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 TGIF2Q9GZN2 237 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 WWTR1Q9GZV5 400 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 IFT46Q9NQC8 304 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 RYDENQ9NUL5 291 aaKnown RBP5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 TMEM100Q9NV29 134 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 CYP8B1Q9UNU6 501 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 R4GN57 208 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 LAMA1P25391 3075 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 KMT2EQ8IZD2 1858 aa5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 ARID1BQ8NFD5 2236 aaPredicted RBP5.47□□□□□ -1.53
UBQLN4-202ENST00000459954 GVINP1Q7Z2Y8 2422 aa5.46□□□□□ -1.53
UBQLN4-202ENST00000459954 SPAG17Q6Q759 2223 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 IGLV3-32A0A0A0MS00 114 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 IGHV5-51A0A0C4DH38 117 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 TEX13DA0A0J9YY54 714 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 LOC102725191A0A1B0GVB3 256 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 TMEM269A0A1B0GVZ9 245 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 A0A1W2PNV4 684 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 A0A1W2PR77 199 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 B4DGG1 531 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 DNASE2O00115 360 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SULT2B1O00204 365 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 ADAM10O14672 748 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 TSPAN4O14817 238 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 GFRA3O60609 400 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 MTRF1O75570 445 aaKnown RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SPDEFO95238 335 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 PLGP00747 810 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 HLA-AP01891 365 aaKnown RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 CYC1P08574 325 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 H2BFMP0C1H6 154 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 CD79AP11912 226 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 PSMB6P28072 239 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 ABCD3P28288 659 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 ECI1P42126 302 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 ALDH3B1P43353 468 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SLC6A9P48067 706 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 DHPSP49366 369 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 PRKXP51817 358 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 NR0B1P51843 470 aaKnown RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 PPIAP62937 165 aaKnown RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 EIF5AP63241 154 aaKnown RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 HSD11B2P80365 405 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 C1orf61Q13536 156 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF169Q14929 603 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 INPP5JQ15735 1006 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 KCNMB1Q16558 191 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 PLEKHN1Q494U1 663 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 CDNFQ49AH0 187 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 TMEM128Q5BJH2 165 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 THEM4Q5T1C6 240 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 C1QL3Q5VWW1 255 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 RTL6Q6ICC9 239 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 KLHL24Q6TFL4 600 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SLC35D2Q76EJ3 337 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 MARCH3Q86UD3 253 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 NAA40Q86UY6 237 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 HOGA1Q86XE5 327 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF761Q86XN6 746 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SFTPA2Q8IWL1 248 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 C9orf40Q8IXQ3 194 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 D2HGDHQ8N465 521 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 PAQR4Q8N4S7 273 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 JAGN1Q8N5M9 183 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 ZNF321PQ8N8H1 164 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 INO80EQ8NBZ0 244 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 CLRN3Q8NCR9 226 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SLC30A7Q8NEW0 376 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 OR1M1Q8NGA1 313 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 OR1J2Q8NGS2 313 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 OR10R2Q8NGX6 335 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 OR8S1Q8NH09 359 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 OR8K3Q8NH51 312 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 RHBDD1Q8TEB9 315 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 PPP1R1CQ8WVI7 109 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 FBXW5Q969U6 566 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SLC25A36Q96CQ1 311 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 DDIT4LQ96D03 193 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 SAT2Q96F10 170 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 DMRTA2Q96SC8 542 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 ELF4Q99607 663 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 VRK1Q99986 396 aaPredicted RBP5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 OCSTAMPQ9BR26 566 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 TPSD1Q9BZJ3 242 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 RTN4RQ9BZR6 473 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 FAM117AQ9C073 453 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 OR8D2Q9GZM6 311 aa5.46□□□□□ -1.54
UBQLN4-202ENST00000459954 TINAGL1Q9GZM7 467 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms