RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SBK2P0C263 348 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 CX3CR1P49238 355 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 ZNF81P51508 661 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 ZNF679Q8IYX0 411 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 PGAM5Q96HS1 289 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 OR2J1Q9GZK6 312 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 SULT1C4O75897 302 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 GPANK1O95872 356 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 IGHV4-39P01824 125 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 CLUP10909 449 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 CCL2P13500 99 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 SRP9P49458 86 aaKnown RBP9.17□□□□□ -0.94
UBR4-208ENST00000459947 CSNK2BP67870 215 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 ZNF786Q8N393 782 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 FAM168AQ92567 244 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 ERGIC1Q969X5 290 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 MBOAT4Q96T53 435 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 DECR2Q9NUI1 292 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 STARD10Q9Y365 291 aa9.17□□□□□ -0.94
UBR4-208ENST00000459947 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 SELENOFO60613 162 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 HEXAP06865 529 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 ACHEP22303 614 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 NAA10P41227 235 aaPredicted RBP9.16□□□□□ -0.94
UBR4-208ENST00000459947 ACTA2P62736 377 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 ACTG2P63267 376 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 TIGD6Q17RP2 521 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 ZBTB37Q5TC79 503 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 PGAP1Q75T13 922 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 CMBLQ96DG6 245 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 RASSF4Q9H2L5 321 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 PTTG3PQ9NZH4 202 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 ZNF12P17014 697 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 MTNR1AP48039 350 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 CDK5R2Q13319 367 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 CELF2-AS1Q8N7Q2 184 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 OR8G5Q8NG78 346 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 SPRYD4Q8WW59 207 aaPredicted RBP9.16□□□□□ -0.94
UBR4-208ENST00000459947 SPSB4Q96A44 273 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 TIMD4Q96H15 378 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 SMG1Q96Q15 3661 aaKnown RBP9.16□□□□□ -0.94
UBR4-208ENST00000459947 ABCA4P78363 2273 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 GGT3PA6NGU5 568 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 FADS2O95864 444 aaKnown RBP9.16□□□□□ -0.94
UBR4-208ENST00000459947 ANXA2P07355 339 aaKnown RBP9.16□□□□□ -0.94
UBR4-208ENST00000459947 GIFP27352 417 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 CAPGP40121 348 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 ZIK1Q3SY52 487 aaPredicted RBP9.16□□□□□ -0.94
UBR4-208ENST00000459947 ZNF101Q8IZC7 436 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 BBS1Q8NFJ9 593 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 OR10S1Q8NGN2 331 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 RHOXF1Q8NHV9 184 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 SORCS2Q96PQ0 1159 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 ADGRL4Q9HBW9 690 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 IKZF2Q9UKS7 526 aa9.16□□□□□ -0.94
UBR4-208ENST00000459947 CD99P14209 185 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 RAB40BQ12829 278 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 ZNF322Q6U7Q0 402 aaPredicted RBP9.15□□□□□ -0.94
UBR4-208ENST00000459947 HPS1Q92902 700 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 SLC29A1Q99808 456 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 OR51B6Q9H340 312 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 MRPL15Q9P015 296 aaKnown RBP9.15□□□□□ -0.94
UBR4-208ENST00000459947 A0A0U1RQV5 110 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 MTRF1O75570 445 aaKnown RBP9.15□□□□□ -0.94
UBR4-208ENST00000459947 PRKXP51817 358 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 TMEM33P57088 247 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 DNM1P46Q6ZS02 220 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 C8orf59Q8N0T1 100 aaPredicted RBP9.15□□□□□ -0.94
UBR4-208ENST00000459947 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 ZNRF4Q8WWF5 429 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 CHODLQ9H9P2 273 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 TMEM100Q9NV29 134 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 MRPS18AQ9NVS2 196 aaKnown RBP9.15□□□□□ -0.94
UBR4-208ENST00000459947 C14orf119Q9NWQ9 140 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 SNX5Q9Y5X3 404 aa9.15□□□□□ -0.94
UBR4-208ENST00000459947 ANKRD30BLA7E2S9 258 aa9.15□□□□□ -0.95
UBR4-208ENST00000459947 GMDSO60547 372 aa9.15□□□□□ -0.95
UBR4-208ENST00000459947 PEG10Q86TG7 708 aaKnown RBP9.15□□□□□ -0.95
UBR4-208ENST00000459947 Q96MF0 132 aa9.15□□□□□ -0.95
UBR4-208ENST00000459947 DNAJC27Q9NZQ0 273 aa9.15□□□□□ -0.95
UBR4-208ENST00000459947 IL19Q9UHD0 177 aa9.15□□□□□ -0.95
UBR4-208ENST00000459947 EXOGQ9Y2C4 368 aaKnown RBP9.15□□□□□ -0.95
UBR4-208ENST00000459947 METTL15A6NJ78 407 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 TPD52L2O43399 206 aaKnown RBP9.14□□□□□ -0.95
UBR4-208ENST00000459947 SSX4O60224 188 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 NGFP01138 241 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 DAOP14920 347 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 PEX2P28328 305 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 MMP16P51512 607 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 PSG7Q13046 419 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 ZNF691Q5VV52 312 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 BIVMQ86UB2 503 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 GALNT4Q8N4A0 578 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 C10orf105Q8TEF2 133 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 CYGBQ8WWM9 190 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 ADI1Q9BV57 179 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
UBR4-208ENST00000459947 NEK6Q9HC98 313 aa9.14□□□□□ -0.95
UBR4-208ENST00000459947 NUFIP1Q9UHK0 495 aaKnown RBP9.14□□□□□ -0.95
UBR4-208ENST00000459947 DHRS7CA6NNS2 312 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms