RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-209	ENST00000459904	CRYBA1	P05813	215 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	MELTF	P08582	738 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	FPR3	P25089	353 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	CDKN2A	P42771	156 aa	Known RBP	12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	SRP9	P49458	86 aa	Known RBP	12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	MAB21L1	Q13394	359 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	PGM2L1	Q6PCE3	622 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	OFCC1	Q8IZS5	231 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	OR2T12	Q8NG77	320 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	ZNF582	Q96NG8	517 aa	Predicted RBP	12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	TECTB	Q96PL2	329 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	TBX15	Q96SF7	602 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	CITED1	Q99966	193 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	THTPA	Q9BU02	230 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	MMADHC	Q9H3L0	296 aa	Predicted RBP	12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	ABCD2	Q9UBJ2	740 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	CLN8	Q9UBY8	286 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	POLR1D	Q9Y2S0	133 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	MMP24	Q9Y5R2	645 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	LHFPL6	Q9Y693	200 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	PLXNB1	O43157	2135 aa		12.52	□□□□□ -0.41
LMNA-209	ENST00000459904	IQCF6	A8MYZ5	107 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	KHDRBS3	O75525	346 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	DNAJC8	O75937	253 aa	Predicted RBP	12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	IFNA14	P01570	189 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	DLX1	P56177	255 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	FXYD6P3	P58550	94 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	LIPE	Q05469	1076 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	DNAL1	Q4LDG9	190 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	CLEC12A	Q5QGZ9	265 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	GPR157	Q5UAW9	335 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	ASPHD2	Q6ICH7	369 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	ERICH5	Q6P6B1	374 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	MBOAT2	Q6ZWT7	520 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	ARPIN	Q7Z6K5	226 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	GLB1L2	Q8IW92	636 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	ACOT11	Q8WXI4	607 aa	Predicted RBP	12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	PLEKHA8	Q96JA3	519 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	CLPTM1L	Q96KA5	538 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	SEMA6A	Q9H2E6	1030 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	FN3K	Q9H479	309 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	BEX1	Q9HBH7	125 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	SMURF1	Q9HCE7	757 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	SPAG4	Q9NPE6	437 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	TMEM100	Q9NV29	134 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	ADA2	Q9NZK5	511 aa		12.51	□□□□□ -0.41
LMNA-209	ENST00000459904	CENPVL3	A0A0U1RRI6	287 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	ELOVL7	A1L3X0	281 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	DIRAS1	O95057	198 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	IGHV4-59	P01825	116 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	IFNW1	P05000	195 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	PPIAL4G	P0DN37	164 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	NCK1	P16333	377 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	MSX2	P35548	267 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	CFHR2	P36980	270 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	CFAP77	Q6ZQR2	320 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	RNF148	Q8N7C7	305 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	OR4F5	Q8NH21	305 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	FAM110D	Q8TAY7	271 aa	Predicted RBP	12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	LHX4	Q969G2	390 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	SLCO4A1	Q96BD0	722 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	RBM4B	Q9BQ04	359 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	PRDM13	Q9H4Q3	707 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	SRA1	Q9HD15	236 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	DNAJB11	Q9UBS4	358 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	PRPF19	Q9UMS4	504 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	AP3M1	Q9Y2T2	418 aa		12.5	□□□□□ -0.41
LMNA-209	ENST00000459904	IGHV3OR15-7	A0A075B7D8	119 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904		A0A0G2JK05	382 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904		A0A0U1RQK1	487 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904		A0A1B0GW55	424 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	CLPSL1	A2RUU4	121 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904		F5H5K5	113 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	PTP4A3	O75365	173 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	TOX4	O94842	621 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	PPP1R3D	O95685	299 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	DUX4L2	P0CJ85	424 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	DUX4L3	P0CJ86	424 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	DUX4L4	P0CJ87	422 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	DUX4L5	P0CJ88	424 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	DUX4L6	P0CJ89	424 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	DUX4L7	P0CJ90	424 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	MMP9	P14780	707 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	SDHA	P31040	664 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	RPS27	P42677	84 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	GSK3B	P49841	420 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	LSM6	P62312	80 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	SEC23B	Q15437	767 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	ZNF826P	Q6ZT77	177 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	TMPRSS11F	Q6ZWK6	438 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	NLRC3	Q7RTR2	1065 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	ARHGAP24	Q8N264	748 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	UTP4	Q969X6	686 aa	Known RBP	12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	HSH2D	Q96JZ2	352 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	NMNAT1	Q9HAN9	279 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	VSX1	Q9NZR4	365 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	DUX4	Q9UBX2	424 aa		12.49	□□□□□ -0.41
LMNA-209	ENST00000459904	SIGLEC7	Q9Y286	467 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms