RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 RIBC2Q9H4K1 309 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 TMEFF2Q9UIK5 374 aaPredicted RBP13.76□□□□□ -0.21
CD28-203ENST00000458610 NOP16Q9Y3C1 178 aaKnown RBP13.76□□□□□ -0.21
CD28-203ENST00000458610 TMEM14AQ9Y6G1 99 aa13.76□□□□□ -0.21
CD28-203ENST00000458610 ACANP16112 2415 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 ZSCAN5BA6NJL1 495 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 SLC22A31A6NKX4 558 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 PRKYO43930 277 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 H2BFMP0C1H6 154 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 SLC2A5P22732 501 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 GZMKP49863 264 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 ALDH3A2P51648 485 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 TNFAIP6P98066 277 aaPredicted RBP13.75□□□□□ -0.21
CD28-203ENST00000458610 HLXQ14774 488 aaPredicted RBP13.75□□□□□ -0.21
CD28-203ENST00000458610 TMEM249Q2WGJ8 235 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 CYB5R2Q6BCY4 276 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 OR2T2Q6IF00 324 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 KCTD18Q6PI47 426 aaPredicted RBP13.75□□□□□ -0.21
CD28-203ENST00000458610 USP51Q70EK9 711 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 MEPCEQ7L2J0 689 aaKnown RBP13.75□□□□□ -0.21
CD28-203ENST00000458610 NAA40Q86UY6 237 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 GID4Q8IVV7 300 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 HPS1Q92902 700 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 TIMD4Q96H15 378 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 MNTQ99583 582 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 POFUT1Q9H488 388 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 OPA3Q9H6K4 179 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 NIPAL2Q9H841 368 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 MSL2Q9HCI7 577 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 TMEM100Q9NV29 134 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 USE1Q9NZ43 259 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 LAMP5Q9UJQ1 280 aa13.75□□□□□ -0.21
CD28-203ENST00000458610 FLNAP21333 2647 aaKnown RBP13.75□□□□□ -0.21
CD28-203ENST00000458610 A0A096LNT2 108 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 IQCF6A8MYZ5 107 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 LYNX1G3V0Z9 82 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 PPIHO43447 177 aaKnown RBP13.74□□□□□ -0.21
CD28-203ENST00000458610 XRCC2O43543 280 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 CD5LO43866 347 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 SELENOFO60613 162 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 CDC14BO60729 498 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 TACSTD2P09758 323 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 LYNX1P0DP58 116 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 CFL1P23528 166 aaKnown RBP13.74□□□□□ -0.21
CD28-203ENST00000458610 CDC42P60953 191 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 EFNB1P98172 346 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 GK2Q14410 553 aaPredicted RBP13.74□□□□□ -0.21
CD28-203ENST00000458610 SPATC1Q76KD6 591 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 PEG10Q86TG7 708 aaKnown RBP13.74□□□□□ -0.21
CD28-203ENST00000458610 BBS1Q8NFJ9 593 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 OR2Z1Q8NG97 314 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 OR52H1Q8NGJ2 320 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 OR8J1Q8NGP2 316 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 SPRYD4Q8WW59 207 aaPredicted RBP13.74□□□□□ -0.21
CD28-203ENST00000458610 TRUB1Q8WWH5 349 aaKnown RBP13.74□□□□□ -0.21
CD28-203ENST00000458610 ASB17Q8WXJ9 295 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 RAB1CQ92928 201 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 SLC22A4Q9H015 551 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 ZNF275Q9NSD4 429 aaPredicted RBP13.74□□□□□ -0.21
CD28-203ENST00000458610 IL19Q9UHD0 177 aa13.74□□□□□ -0.21
CD28-203ENST00000458610 GGT3PA6NGU5 568 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 IFNL4K9M1U5 179 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 NCR1O76036 304 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 BAG2O95816 211 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 ALPLP05186 524 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 ALOX5APP20292 161 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 EPHA2P29317 976 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 CX3CR1P49238 355 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 TMED1Q13445 227 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 DEGS2Q6QHC5 323 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 ZBTB49Q6ZSB9 765 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 Q71RC1 249 aaPredicted RBP13.73□□□□□ -0.21
CD28-203ENST00000458610 KRT77Q7Z794 578 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 PQLC1Q8N2U9 271 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 GTF3AQ92664 365 aaKnown RBP13.73□□□□□ -0.21
CD28-203ENST00000458610 RFKQ969G6 155 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 YIPF5Q969M3 257 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 IL4I1Q96RQ9 567 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 CNN2Q99439 309 aaKnown RBP13.73□□□□□ -0.21
CD28-203ENST00000458610 HAO2Q9NYQ3 351 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 WARS2Q9UGM6 360 aaKnown RBP13.73□□□□□ -0.21
CD28-203ENST00000458610 N6AMT1Q9Y5N5 214 aa13.73□□□□□ -0.21
CD28-203ENST00000458610 MAP1AP78559 2803 aaPredicted RBP13.72□□□□□ -0.21
CD28-203ENST00000458610 AKAP9Q99996 3911 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 TEP1Q99973 2627 aaKnown RBP13.72□□□□□ -0.21
CD28-203ENST00000458610 IGHV4-61A0A0C4DH41 118 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 CLDN25C9JDP6 229 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 EI24O14681 340 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 PHYHO14832 338 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 ZNF254O75437 659 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 ANXA2P07355 339 aaKnown RBP13.72□□□□□ -0.21
CD28-203ENST00000458610 PSKH1P11801 424 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 DDOSTP39656 456 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 OPRL1P41146 370 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 NAA10P41227 235 aaPredicted RBP13.72□□□□□ -0.21
CD28-203ENST00000458610 SRP9P49458 86 aaKnown RBP13.72□□□□□ -0.21
CD28-203ENST00000458610 GABPB1Q06547 395 aaPredicted RBP13.72□□□□□ -0.21
CD28-203ENST00000458610 POU4F2Q12837 409 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 SNCBQ16143 134 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms