RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 NSL1Q96IY1 281 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 DUX5Q96PT3 197 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 C1QTNF5Q9BXJ0 243 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 EGLN3Q9H6Z9 239 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 IL1RAPQ9NPH3 570 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 DDX28Q9NUL7 540 aaKnown RBP13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 TMEM100Q9NV29 134 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 VWFP04275 2813 aa13.23□□□□□ -0.29
CHCHD3-204ENST00000457942 IQCF6A8MYZ5 107 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 MLNRO43193 412 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 IDH3BO43837 385 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 HLA-DPB1P04440 258 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 ACSM4P0C7M7 580 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 GSSP48637 474 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 RAD23AP54725 363 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 TPTEP56180 551 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 RPL13AP3Q6NVV1 102 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 PGBD2Q6P3X8 592 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 TREML4Q6UXN2 200 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 CYP2R1Q6VVX0 501 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 PGAP1Q75T13 922 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 MRPL21Q7Z2W9 205 aaKnown RBP13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 ZBTB46Q86UZ6 589 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 C1orf87Q8N0U7 546 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 OR9Q2Q8NGE9 314 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 SPRYD4Q8WW59 207 aaPredicted RBP13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 SLC30A2Q9BRI3 323 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 SSBP3Q9BWW4 388 aaPredicted RBP13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF696Q9H7X3 374 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 NTN4Q9HB63 628 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 TBC1D23Q9NUY8 699 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 CD300AQ9UGN4 299 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 LRCH1Q9Y2L9 728 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 INSIG2Q9Y5U4 225 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 CDH10Q9Y6N8 788 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 CMYA5Q8N3K9 4069 aa13.22□□□□□ -0.29
CHCHD3-204ENST00000457942 A8MXK9 166 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 F5H0A9 414 aaPredicted RBP13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 TRAPPC2LH3BP13 241 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 M0R135 149 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 KRT36O76013 467 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 T-ENOLP0DO92 83 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF12P17014 697 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 PYCR1P32322 319 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 GNB2P62879 340 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 UBA52P62987 128 aaKnown RBP13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 GK2Q14410 553 aaPredicted RBP13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 SHISA2Q6UWI4 295 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 BTNL3Q6UXE8 466 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 NLRC3Q7RTR2 1065 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 SIGLECL1Q8N7X8 197 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 ZDHHC22Q8N966 263 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 CYB561A3Q8NBI2 242 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 SLCO4A1Q96BD0 722 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF799Q96GE5 643 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 ZNF747Q9BV97 191 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 CYB5R1Q9UHQ9 305 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 KCNG2Q9UJ96 466 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 NUP50Q9UKX7 468 aa13.21□□□□□ -0.29
CHCHD3-204ENST00000457942 DOCK11Q5JSL3 2073 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 TVP23AA6NH52 213 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 FSHBP01225 129 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 GGT2P36268 569 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 TRPM8Q7Z2W7 1104 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 KLBQ86Z14 1044 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 LINC00471Q8N535 108 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 OR8B3Q8NGG8 313 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 OR11L1Q8NGX0 322 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 OR2T4Q8NH00 348 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 TAF15Q92804 592 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 NEIL1Q96FI4 390 aaPredicted RBP13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 PLEKHA8Q96JA3 519 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 OR8B2Q96RD0 313 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 MRPL22Q9NWU5 206 aaKnown RBP13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 MIOXQ9UGB7 285 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 LYVE1Q9Y5Y7 322 aa13.2□□□□□ -0.3
CHCHD3-204ENST00000457942 A0A0G2JK05 382 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 GGT3PA6NGU5 568 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 CCNB2O95067 398 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 SPARCP09486 303 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 ATP6V1B2P21281 511 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 CALB2P22676 271 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 RPS27P42677 84 aaKnown RBP13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 MNAT1P51948 309 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 TAF13Q15543 124 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 OR8G1Q15617 311 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 RSPO1Q2MKA7 263 aaPredicted RBP13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 SPATS1Q496A3 300 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 FAM201AQ5SY85 155 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 COLCA1Q6ZS62 124 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 NAA40Q86UY6 237 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 OR51L1Q8NGJ5 315 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 OR4C15Q8NGM1 316 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 OR9Q1Q8NGQ5 310 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 MAP6Q96JE9 813 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 CLPTM1LQ96KA5 538 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 TMEM246Q9BRR3 403 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms