RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ALOX5APP20292 161 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 ADPRHP54922 357 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 BPIFB3P59826 476 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 FKBP1BP68106 108 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 KRT33BQ14525 404 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 NFATC4Q14934 902 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 OR1Q1Q15612 314 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 NDUFA9Q16795 377 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 C1QL2Q7Z5L3 287 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF561Q8N587 486 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 SUMF2Q8NBJ7 301 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 OR56A1Q8NGH5 318 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 STT3BQ8TCJ2 826 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 CXorf40BQ96DE9 158 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC41A2Q96JW4 573 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM106CQ9BVX2 250 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC17A9Q9BYT1 436 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 OR2AG1Q9H205 316 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 PDE7BQ9NP56 450 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 EMC3Q9P0I2 261 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 KLHL42Q9P2K6 505 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 PCDHB8Q9UN66 801 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 MRPS28Q9Y2Q9 187 aaKnown RBP4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 MRPS18CQ9Y3D5 142 aaKnown RBP4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 INSL6Q9Y581 213 aa4.04□□□□□ -1.76
DEPDC1-202ENST00000456315 CARNS1A5YM72 827 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC25A4P12235 298 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 NID1P14543 1247 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 HTR2CP28335 458 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PEBP1P30086 187 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MAS1LP35410 378 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 BCL6P41182 706 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 TSPAN7P41732 249 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 DIO1P49895 249 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 NCBP2P52298 156 aaKnown RBP eCLIP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PRSS12P56730 875 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 EGR3Q06889 387 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MPPED2Q15777 294 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SCGB2B2Q4G0G5 96 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 WDR25Q64LD2 544 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PARGQ86W56 976 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 FAM71E2Q8N5Q1 922 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ASB5Q8WWX0 329 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 OSTF1Q92882 214 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 RFKQ969G6 155 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 POP5Q969H6 163 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MS4A6EQ96DS6 147 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ARL5BQ96KC2 179 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF285Q96NJ3 590 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 CDCA3Q99618 268 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 TRIM62Q9BVG3 475 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ADAP2Q9NPF8 381 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 FOXD3Q9UJU5 478 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 YBX2Q9Y2T7 364 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MRPS23Q9Y3D9 190 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 EPG5Q9HCE0 2579 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 C13orf42A0A1B0GVH6 325 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 FAM221AA4D161 298 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 RHPN2P1A8MT19 583 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 C1orf196B1AJZ1 125 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 NME2P1O60361 137 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 CTSVO60911 334 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 HEXBP07686 556 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 AK4P27144 223 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PBX2P40425 430 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MNDAP41218 407 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 WNT5AP41221 380 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PRLHRP49683 370 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PGDP52209 483 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 EFNA3P52797 238 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 UCP2P55851 309 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 TAS2R38P59533 333 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 AP1S1P61966 158 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PSG6Q00889 435 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 FOXE3Q13461 319 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 KIAA0141Q14154 515 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 EXOSC7Q15024 291 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 DAZAP2Q15038 168 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 EBPQ15125 230 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MEP1BQ16820 701 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ISXQ2M1V0 245 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF880Q6PDB4 577 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ENPP7Q6UWV6 458 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 Q6ZRG5 221 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 KCTD9Q7L273 389 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 KLHDC8AQ8IYD2 350 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SPAG16Q8N0X2 631 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 OR10AD1Q8NGE0 317 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SNX22Q96L94 193 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SYT3Q9BQG1 590 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 EFCAB11Q9BUY7 163 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PRSS16Q9NQE7 514 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 HCFC1R1Q9NWW0 138 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PLA2G3Q9NZ20 509 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MSRAQ9UJ68 235 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 NOP16Q9Y3C1 178 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 WDR45Q9Y484 360 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 THADAQ6YHU6 1953 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 RPL36A-HNRNPH2H7BZ11 118 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 OR2F2O95006 317 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms