RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR5AS1Q8N127 324 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR10P1Q8NGE3 313 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM56Q96MV1 263 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 HBEGFQ99075 208 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 NTN4Q9HB63 628 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 Q9N2K0 584 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 M0R1X1 148 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 GDI1P31150 447 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 FAM3AP98173 230 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 RAB33AQ14088 237 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 DNLZQ5SXM8 178 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SORBS1Q9BX66 1292 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 NAT8Q9UHE5 227 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OPN1SWP03999 348 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 APEX1P27695 318 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 XCR1P46094 333 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 BIDP55957 195 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 MRPS21P82921 87 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 EBPQ15125 230 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ECM1Q16610 540 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 FCRLAQ7L513 359 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 NLRC3Q7RTR2 1065 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 PIM3Q86V86 326 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM183AQ8IXX5 376 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM229BQ8NBD8 167 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 MRGPRX4Q96LA9 322 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 MRGPRX1Q96LB2 322 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 LINC00862A6NCI5 91 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 A8MX80 341 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 MFNGO00587 321 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 NUDT3O95989 172 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SULT1A3P0DMM9 295 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SULT1A4P0DMN0 295 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CD46P15529 392 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ORM2P19652 201 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF90Q03938 601 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR2T2Q6IF00 324 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF534Q76KX8 674 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 LINC00346Q8IVM7 164 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ANKLE1Q8NAG6 615 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 EXTL1Q92935 676 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 MRGPRX3Q96LB0 322 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ABHD1Q96SE0 405 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CRB3Q9BUF7 120 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 MARCH5Q9NX47 278 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 GNG12Q9UBI6 72 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 GOLT1BQ9Y3E0 138 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 FZD9O00144 591 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 FGF2P09038 288 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 FURINP09958 794 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SSTR2P30874 369 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CCR2P41597 374 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 RBP2P50120 134 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 OR1Q1Q15612 314 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 LAX1Q8IWV1 398 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 UBAC2Q8NBM4 344 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 IGSF8Q969P0 613 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 KTI12Q96EK9 354 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF668Q96K58 619 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 SIRT5Q9NXA8 310 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 MRPS28Q9Y2Q9 187 aaKnown RBP4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ASB1Q9Y576 335 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 PAPPA2Q9BXP8 1791 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 CCDC187A0A096LP49 1063 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TLCD2A6NGC4 264 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ZAR1LA6NP61 321 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM233B4DJY2 109 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 IGF2P01344 180 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 GLULP15104 373 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 LSMEM1Q8N8F7 131 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 GLIS3Q8NEA6 775 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ASB5Q8WWX0 329 aa4.77□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF840PA6NDX5 716 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 EN2P19622 333 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 C21orf33P30042 268 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SDHAP31040 664 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SOX2P48431 317 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 NOVP48745 357 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 SELENBP1Q13228 472 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 GLYATL3Q5SZD4 288 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF626Q68DY1 528 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OVCH2Q7RTZ1 564 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM178AQ8NBL3 297 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 OR4S1Q8NGB4 309 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 LILRB1Q8NHL6 650 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF296Q8WUU4 475 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CLEC4DQ8WXI8 215 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 ZNF516Q92618 1163 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 BCL2L2Q92843 193 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 RSG1Q9BU20 258 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 FCF1Q9Y324 198 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 TET2Q6N021 2002 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 FOLR3P41439 243 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 GPR4P46093 362 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 DSC1Q08554 894 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM107Q6UX40 140 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 CPEB2Q7Z5Q1 589 aaKnown RBP4.76□□□□□ -1.65
CSMD3-204ENST00000455883 NUDCD2Q8WVJ2 157 aa4.76□□□□□ -1.65
CSMD3-204ENST00000455883 TOMM40LQ969M1 308 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms