RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TMEFF2Q9UIK5 374 aaPredicted RBP14.73□□□□□ -0.05
USP39-208ENST00000455732 OAZ3Q9UMX2 235 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 SVEP1Q4LDE5 3571 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 TANC2Q9HCD6 1990 aa14.73□□□□□ -0.05
USP39-208ENST00000455732 COL6A5A8TX70 2615 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 IGHV1-69-2A0A0G2JMI3 117 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 LRP5LA4QPB2 252 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 ZAR1LA6NP61 321 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 H3BNX3 289 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 MITFO75030 526 aaPredicted RBP14.72□□□□□ -0.05
USP39-208ENST00000455732 SELEP16581 610 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 IGFBP5P24593 272 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 GPR6P46095 362 aaPredicted RBP14.72□□□□□ -0.05
USP39-208ENST00000455732 HLXQ14774 488 aaPredicted RBP14.72□□□□□ -0.05
USP39-208ENST00000455732 TSTQ16762 297 aaKnown RBP14.72□□□□□ -0.05
USP39-208ENST00000455732 SLX4IPQ5VYV7 408 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 Q6ZR03 302 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 USP51Q70EK9 711 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 CXXC5Q7LFL8 322 aaKnown RBP14.72□□□□□ -0.05
USP39-208ENST00000455732 DPY19L4Q7Z388 723 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 C10orf67Q8IYJ2 551 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 RNF133Q8WVZ7 376 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 HPS1Q92902 700 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 MSI2Q96DH6 328 aaKnown RBP14.72□□□□□ -0.05
USP39-208ENST00000455732 ZMYND19Q96E35 227 aaPredicted RBP14.72□□□□□ -0.05
USP39-208ENST00000455732 KCNJ15Q99712 375 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 SOX7Q9BT81 388 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 EGLN1Q9GZT9 426 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 SEMA6AQ9H2E6 1030 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 TOR3AQ9H497 397 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 MSL2Q9HCI7 577 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 TVP23BQ9NYZ1 205 aa14.72□□□□□ -0.05
USP39-208ENST00000455732 FBN1P35555 2871 aaKnown RBP14.71□□□□□ -0.05
USP39-208ENST00000455732 A0A1B0GWJ7 208 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 IQCF6A8MYZ5 107 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 TPD52L2O43399 206 aaKnown RBP14.71□□□□□ -0.05
USP39-208ENST00000455732 LCATP04180 440 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 EPHA2P29317 976 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 SLC15A1P46059 708 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 GRB2P62993 217 aaKnown RBP14.71□□□□□ -0.05
USP39-208ENST00000455732 MALLQ13021 153 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 EIF2B1Q14232 305 aaKnown RBP14.71□□□□□ -0.05
USP39-208ENST00000455732 GK2Q14410 553 aaPredicted RBP14.71□□□□□ -0.05
USP39-208ENST00000455732 TRIP10Q15642 601 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 KLHL12Q53G59 568 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 C12orf73Q69YU5 71 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 NAA40Q86UY6 237 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 ZNF454Q8N9F8 522 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 BBS1Q8NFJ9 593 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 CIB1Q99828 191 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 ABHD6Q9BV23 337 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 GABARAPL3Q9BY60 117 aa14.71□□□□□ -0.05
USP39-208ENST00000455732 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.71□□□□□ -0.05
USP39-208ENST00000455732 PRKYO43930 277 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 LMX1BO60663 402 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 CDC14BO60729 498 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 TNFSF4P23510 183 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 IL2RGP31785 369 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 OPRL1P41146 370 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 SLC6A9P48067 706 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 EFNB1P98172 346 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 TAF13Q15543 124 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 CHRFAM7AQ494W8 412 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 OR2T2Q6IF00 324 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 OR8G5Q8NG78 346 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 OTOSQ8NHW6 89 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 C1orf159Q96HA4 380 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 ZNF582Q96NG8 517 aaPredicted RBP14.7□□□□□ -0.06
USP39-208ENST00000455732 RAB3IPQ96QF0 476 aaPredicted RBP14.7□□□□□ -0.06
USP39-208ENST00000455732 PKP2Q99959 881 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 RBM4BQ9BQ04 359 aaKnown RBP14.7□□□□□ -0.06
USP39-208ENST00000455732 CENPMQ9NSP4 180 aa14.7□□□□□ -0.06
USP39-208ENST00000455732 CCDC182A6NF36 153 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 SAC3D1A6NKF1 404 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 CLDN25C9JDP6 229 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 PPIHO43447 177 aaKnown RBP14.69□□□□□ -0.06
USP39-208ENST00000455732 SELENOFO60613 162 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 APOC1P02654 83 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 TNFAIP6P98066 277 aaPredicted RBP14.69□□□□□ -0.06
USP39-208ENST00000455732 APOFQ13790 326 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 HFEQ30201 348 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 SNAI3Q3KNW1 292 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 LCN1P1Q5VSP4 162 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 FAM166AQ6J272 317 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 PGAP1Q75T13 922 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 OR2Z1Q8NG97 314 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 OR13G1Q8NGZ3 307 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 AMELYQ99218 206 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 SLC30A2Q9BRI3 323 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 OPA3Q9H6K4 179 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 IL19Q9UHD0 177 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 CDC42EP3Q9UKI2 254 aa14.69□□□□□ -0.06
USP39-208ENST00000455732 LOC100289279A0A1B0GTE1 492 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 LYNP07948 512 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 TNFRSF1AP19438 455 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 ANOS1P23352 680 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 PRKXP51817 358 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 RPS7P62081 194 aaKnown RBP14.68□□□□□ -0.06
USP39-208ENST00000455732 SLC3A1Q07837 685 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 MRPL21Q7Z2W9 205 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms