RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ECDO95905 644 aaPredicted RBP12.06□□□□□ -0.48
CLK3-203ENST00000454830 ARG2P78540 354 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 ASPHD2Q6ICH7 369 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 ZNF782Q6ZMW2 699 aaPredicted RBP12.06□□□□□ -0.48
CLK3-203ENST00000454830 NAXEQ8NCW5 288 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 OR1M1Q8NGA1 313 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 CHAC2Q8WUX2 184 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 NIPAL2Q9H841 368 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 NUBP2Q9Y5Y2 271 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 GLSO94925 669 aaPredicted RBP12.06□□□□□ -0.48
CLK3-203ENST00000454830 AIMP2Q13155 320 aaKnown RBP12.06□□□□□ -0.48
CLK3-203ENST00000454830 C3AR1Q16581 482 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 PLA1AQ53H76 456 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 NHLRC1Q6VVB1 395 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 CMTM3Q96MX0 182 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 CALHM2Q9HA72 323 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 TMEM138Q9NPI0 162 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 A0A0A6YYJ9 748 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 ARPC1BO15143 372 aaKnown RBP12.06□□□□□ -0.48
CLK3-203ENST00000454830 XRCC3O43542 346 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 TMPRSS7Q7RTY8 843 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 OR4D6Q8NGJ1 314 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 C15orf40Q8WUR7 153 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 SORCS2Q96PQ0 1159 aa12.06□□□□□ -0.48
CLK3-203ENST00000454830 PAQR5Q9NXK6 330 aaPredicted RBP12.06□□□□□ -0.48
CLK3-203ENST00000454830 FTH1P19P0C7X4 201 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 CCNOP22674 350 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 B3GALT5-AS1P59052 145 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 RRAS2P62070 204 aaPredicted RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 ANKRD16Q6P6B7 361 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 CNTD2Q9H8S5 307 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 PARD6AQ9NPB6 346 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 FLVCR1Q9Y5Y0 555 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 NEURL1O76050 574 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 SYNGR4O95473 234 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 ITGB2P05107 769 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 GRB2P62993 217 aaKnown RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 KLF9Q13886 244 aaPredicted RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 FCN2Q15485 313 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 CEACAM16Q2WEN9 425 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 ADGRE4PQ86SQ3 457 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 MCEMP1Q8IX19 187 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 GALNT16Q8N428 558 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 AKR7LQ8NHP1 331 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 GIMAP1Q8WWP7 306 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 ZNF486Q96H40 463 aaPredicted RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 SPRY4Q9C004 299 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 DEFB127Q9H1M4 99 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 ZNF319Q9P2F9 582 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 PCDHGA1Q9Y5H4 931 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 METTL21EPA6NDL7 271 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 SULT1B1O43704 296 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 SRSF10O75494 262 aaKnown RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 FAUP35544 74 aaKnown RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 ZNF93P35789 620 aaPredicted RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 VEGFCP49767 419 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 CCL11P51671 97 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 PMPCAQ10713 525 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 JMJD6Q6NYC1 403 aaPredicted RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 ANGPTL5Q86XS5 388 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 ZIC4Q8N9L1 334 aa12.05□□□□□ -0.48
CLK3-203ENST00000454830 NOSIPQ9Y314 301 aaKnown RBP12.05□□□□□ -0.48
CLK3-203ENST00000454830 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
CLK3-203ENST00000454830 LCATP04180 440 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 ISG15P05161 165 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 STOMP27105 288 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 BTCP35070 178 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 FREM1Q5H8C1 2179 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 M0R135 149 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 GSTZ1O43708 216 aaPredicted RBP12.04□□□□□ -0.48
CLK3-203ENST00000454830 MPIG6BO95866 241 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 PLATP00750 562 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 ALDOBP05062 364 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 HLA-DMAP28067 261 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 MRPS10P82664 201 aaKnown RBP12.04□□□□□ -0.48
CLK3-203ENST00000454830 TMEM255AQ5JRV8 349 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 H3F3CQ6NXT2 135 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 GGNQ86UU5 652 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 CMBLQ96DG6 245 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 ZNF799Q96GE5 643 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 C20orf85Q9H1P6 137 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 OR51J1Q9H342 316 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 COPZ2Q9P299 210 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 LOC100509620A0A075B734 347 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 LOC102725191A0A1B0GVB3 256 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 TMEM235A6NFC5 223 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 CTDSPLO15194 276 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 SGCEO43556 437 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 TSC22D2O75157 780 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 FAM157BP0CG42 384 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 PSMB1P20618 241 aaKnown RBP12.04□□□□□ -0.48
CLK3-203ENST00000454830 MAB21L1Q13394 359 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 SLC16A14Q7RTX9 510 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 SLC22A24Q8N4F4 322 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 NKAIN3Q8N8D7 197 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 SPTSSAQ969W0 71 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 S100A13Q99584 98 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 TTTY12Q9BZ98 90 aa12.04□□□□□ -0.48
CLK3-203ENST00000454830 RABL2AQ9UBK7 228 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms