RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 NAA40Q86UY6 237 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 GID4Q8IVV7 300 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 RDH5Q92781 318 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 CMBLQ96DG6 245 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 HRASLS5Q96KN8 279 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 DIRC2Q96SL1 478 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 TEAD3Q99594 435 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 C9orf16Q9BUW7 83 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 YIPF3Q9GZM5 350 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 CHODLQ9H9P2 273 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 HAO2Q9NYQ3 351 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 PLSCR5A0PG75 271 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 C5orf63A6NC05 138 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 SLC22A31A6NKX4 558 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 TLX2O43763 284 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-205ENST00000454542 LCATP04180 440 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 TACSTD2P09758 323 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 ALOX5APP20292 161 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 SLC15A1P46059 708 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 RAD23AP54725 363 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 RPS7P62081 194 aaKnown RBP12.04□□□□□ -0.48
HDAC4-205ENST00000454542 MEPCEQ7L2J0 689 aaKnown RBP12.04□□□□□ -0.48
HDAC4-205ENST00000454542 BCDIN3DQ7Z5W3 292 aaKnown RBP12.04□□□□□ -0.48
HDAC4-205ENST00000454542 MAPK1IP1LQ8NDC0 245 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 OR8J1Q8NGP2 316 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 SPSB4Q96A44 273 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 MBOAT4Q96T53 435 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 SAP30LQ9HAJ7 183 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 ADGRL4Q9HBW9 690 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 MSL2Q9HCI7 577 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 ZDHHC8Q9ULC8 765 aa12.04□□□□□ -0.48
HDAC4-205ENST00000454542 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
HDAC4-205ENST00000454542 ZFHX3Q15911 3703 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 IGHV4-61A0A0C4DH41 118 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 PRR32B1ATL7 298 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 LYNX1G3V0Z9 82 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 LY6G6DO95868 133 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 LYNX1P0DP58 116 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 SELEP16581 610 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 USF1P22415 310 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-205ENST00000454542 CRYBB2P43320 205 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 CX3CR1P49238 355 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 PRKXP51817 358 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 PSMA6P60900 246 aaKnown RBP12.03□□□□□ -0.48
HDAC4-205ENST00000454542 CCL8P80075 99 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 GLYATL3Q5SZD4 288 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 OR2T2Q6IF00 324 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 CLEC9AQ6UXN8 241 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 ZNF540Q8NDQ6 660 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 OR8G5Q8NG78 346 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 CNN2Q99439 309 aaKnown RBP12.03□□□□□ -0.48
HDAC4-205ENST00000454542 SLC29A1Q99808 456 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 SLC30A2Q9BRI3 323 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 OPA3Q9H6K4 179 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 ZNF275Q9NSD4 429 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-205ENST00000454542 CENPMQ9NSP4 180 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 COPS3Q9UNS2 423 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 ORC6Q9Y5N6 252 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
HDAC4-205ENST00000454542 MLNRO43193 412 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 XRCC2O43543 280 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 SPRY3O43610 288 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 LILRA1O75019 489 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 APOC1P02654 83 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 MRPL3P09001 348 aaKnown RBP12.02□□□□□ -0.49
HDAC4-205ENST00000454542 COL8A2P25067 703 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 HTR1FP30939 366 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 SLC6A9P48067 706 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 ROM1Q03395 351 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF92Q03936 586 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 MALLQ13021 153 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 TMED1Q13445 227 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 TMEM249Q2WGJ8 235 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 SPRNQ5BIV9 151 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 SLC25A30Q5SVS4 291 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 DEGS2Q6QHC5 323 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 USP51Q70EK9 711 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 SPATC1Q76KD6 591 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF283Q8N7M2 679 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 OR2AE1Q8NHA4 323 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 FAM81AQ8TBF8 368 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 TRUB1Q8WWH5 349 aaKnown RBP12.02□□□□□ -0.49
HDAC4-205ENST00000454542 STMN2Q93045 179 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 ELMOD3Q96FG2 381 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 IL4I1Q96RQ9 567 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 MNTQ99583 582 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 REPIN1Q9BWE0 567 aaKnown RBP12.02□□□□□ -0.49
HDAC4-205ENST00000454542 NIPAL2Q9H841 368 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 LRP12Q9Y561 859 aa12.02□□□□□ -0.49
HDAC4-205ENST00000454542 IGHV1-69-2A0A0G2JMI3 117 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 DLGAP1O14490 977 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 CD5LO43866 347 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 H2BFMP0C1H6 154 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 SBK2P0C263 348 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 SLC2A1P11166 492 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 GABRB1P18505 474 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 HSD11B1P28845 292 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 DCTDP32321 178 aa12.01□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF121P58317 390 aaPredicted RBP12.01□□□□□ -0.49
HDAC4-205ENST00000454542 CDC42P60953 191 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms