RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SNAI3Q3KNW1 292 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 SLC35F2Q8IXU6 374 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 ZNF283Q8N7M2 679 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 TPK1Q9H3S4 243 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 CLN6Q9NWW5 311 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 AASSQ9UDR5 926 aa23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 PURGQ9UJV8 347 aaKnown RBP23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.9■■□□□ 1.42
SMARCC1-203ENST00000454240 C17orf100A8MU93 164 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 LY6HO94772 140 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 ERCC1P07992 297 aaPredicted RBP23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 ANOS1P23352 680 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 LIPAP38571 399 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 CX3CR1P49238 355 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 CLEC12BQ2HXU8 276 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 KCTD18Q6PI47 426 aaPredicted RBP23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 DEGS2Q6QHC5 323 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 LRRN1Q6UXK5 716 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF771Q7L3S4 317 aaPredicted RBP23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 PRSS45Q7RTY3 260 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 SNX33Q8WV41 574 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 ASB17Q8WXJ9 295 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 Q96MF0 132 aa23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 CGGBP1Q9UFW8 167 aaPredicted RBP23.89■■□□□ 1.41
SMARCC1-203ENST00000454240 C5orf63A6NC05 138 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 PRR32B1ATL7 298 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 SLC2A1P11166 492 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 ADARB1P78563 741 aaKnown RBP23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 ROM1Q03395 351 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 MALLQ13021 153 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 TTC23Q5W5X9 447 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 GTF3AQ92664 365 aaKnown RBP23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 APOL4Q9BPW4 351 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 NIPAL2Q9H841 368 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 CYSLTR2Q9NS75 346 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 LRP12Q9Y561 859 aa23.88■■□□□ 1.41
SMARCC1-203ENST00000454240 PHYHO14832 338 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 TIMM8AO60220 97 aaPredicted RBP23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 MT-ND5P03915 603 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 MTNR1AP48039 350 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 CXCR4P61073 352 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 GK2Q14410 553 aaPredicted RBP23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 KRT77Q7Z794 578 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 DHRSXQ8N5I4 330 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 RFLNBQ8N5W9 214 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 NRG4Q8WWG1 115 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 OR8B4Q96RC9 309 aa23.87■■□□□ 1.41
SMARCC1-203ENST00000454240 PLSCR5A0PG75 271 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF670-ZNF695F2Z2N8 137 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 OR2T7P0C7T2 308 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF81P51508 661 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF121P58317 390 aaPredicted RBP23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF691Q5VV52 312 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF679Q8IYX0 411 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF525Q8N782 197 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 OR2T27Q8NH04 317 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 CYGBQ8WWM9 190 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 Q96MT0 163 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 MROQ9BYG7 248 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 VCXQ9H320 206 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 SP140LQ9H930 580 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 NKIRAS2Q9NYR9 191 aa23.86■■□□□ 1.41
SMARCC1-203ENST00000454240 SNTNA6NMZ2 147 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 PSMD9O00233 223 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF254O75437 659 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 APOL3O95236 402 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 ANXA2P07355 339 aaKnown RBP23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 DCTDP32321 178 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF92Q03936 586 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 GLYATL3Q5SZD4 288 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 OR2T2Q6IF00 324 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF322Q6U7Q0 402 aaPredicted RBP23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 USP51Q70EK9 711 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 APH1BQ8WW43 257 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 REPIN1Q9BWE0 567 aaKnown RBP23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 N6AMT1Q9Y5N5 214 aa23.85■■□□□ 1.41
SMARCC1-203ENST00000454240 ZSCAN5BA6NJL1 495 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 CLIC3O95833 236 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 ADH4P08319 380 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 ATP6V1E1P36543 226 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 MAGEB1P43366 347 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 DSCR9P59020 149 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 EGR3Q06889 387 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 RIPK1Q13546 671 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 PCGF3Q3KNV8 242 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 PGAP1Q75T13 922 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 OR52H1Q8NGJ2 320 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 OR2AE1Q8NHA4 323 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 SPSB4Q96A44 273 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 RNFT2Q96EX2 444 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 ADI1Q9BV57 179 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 TTTY10Q9BZA0 68 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 MSL2Q9HCI7 577 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 MYOZ1Q9NP98 299 aaPredicted RBP23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 ZNF319Q9P2F9 582 aa23.84■■□□□ 1.41
SMARCC1-203ENST00000454240 A0A1W2PQL4 384 aaPredicted RBP23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 IQCF6A8MYZ5 107 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 H0YAE9 185 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 J3QRE1 110 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms