RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 POU3F2P20265 443 aaPredicted RBP10.4□□□□□ -0.75
VTA1-203ENST00000452973 MSR1P21757 451 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 PRSS12P56730 875 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 B3GALT5-AS1P59052 145 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 CHAF1BQ13112 559 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 ZNF782Q6ZMW2 699 aaPredicted RBP10.4□□□□□ -0.75
VTA1-203ENST00000452973 ZIC4Q8N9L1 334 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 CHST4Q8NCG5 386 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 OR1M1Q8NGA1 313 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 TMEM9BQ9NQ34 198 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 PLEK2Q9NYT0 353 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 PCSK5Q92824 1860 aa10.4□□□□□ -0.75
VTA1-203ENST00000452973 CCDC187A0A096LP49 1063 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 GJE1A6NN92 205 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 AKR7A2O43488 359 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 PEX14O75381 377 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 VAMP5O95183 116 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 CD3DP04234 171 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 RLN1P04808 185 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 CSN2P05814 226 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 NTF4P34130 210 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 RAD52P43351 418 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 MRPS10P82664 201 aaKnown RBP10.39□□□□□ -0.75
VTA1-203ENST00000452973 PMPCAQ10713 525 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 FAPQ12884 760 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 Q5BKY6 102 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 CDCP2Q5VXM1 449 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 ZNF813Q6ZN06 617 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 ADGRE4PQ86SQ3 457 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 TCTE3Q8IZS6 198 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 OR4C16Q8NGL9 310 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 OR10D3Q8NH80 312 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 LIN37Q96GY3 246 aaPredicted RBP10.39□□□□□ -0.75
VTA1-203ENST00000452973 PGAM5Q96HS1 289 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 SORCS2Q96PQ0 1159 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 NELFAQ9H3P2 528 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 CRLF2Q9HC73 371 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 TMEM138Q9NPI0 162 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 PNRC2Q9NPJ4 139 aaKnown RBP10.39□□□□□ -0.75
VTA1-203ENST00000452973 RABL2AQ9UBK7 228 aaPredicted RBP10.39□□□□□ -0.75
VTA1-203ENST00000452973 RABL2BQ9UNT1 228 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 A0A1B0GTI1 187 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 LOC102725191A0A1B0GVB3 256 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 TMEM235A6NFC5 223 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 FAM166BA8MTA8 275 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 H7C417 338 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 TSC22D2O75157 780 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 CELA3AP09093 270 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 RAB3AP20336 220 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 RAC3P60763 192 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 CDK10Q15131 360 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 ATP1A1-AS1Q5TC04 95 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 FGD2Q7Z6J4 655 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 ZNF101Q8IZC7 436 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 UXS1Q8NBZ7 420 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 C15orf40Q8WUR7 153 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 LOXL4Q96JB6 756 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 CHIAQ9BZP6 476 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 SPRY4Q9C004 299 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 MTFP1Q9UDX5 166 aa10.39□□□□□ -0.75
VTA1-203ENST00000452973 C7orf66A4D0T2 115 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 TOXO94900 526 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 HCKP08631 526 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ZNF17P17021 662 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 CHMP1BQ7LBR1 199 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ANGPTL5Q86XS5 388 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 TMEM123Q8N131 208 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 OR5D18Q8NGL1 313 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ABHD3Q8WU67 409 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 GPER1Q99527 375 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ZNF69Q9UC07 566 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 HSPB11Q9Y547 144 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ZNF93P35789 620 aaPredicted RBP10.38□□□□□ -0.75
VTA1-203ENST00000452973 GZMKP49863 264 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ENDOGQ14249 297 aaKnown RBP10.38□□□□□ -0.75
VTA1-203ENST00000452973 TGIF1Q15583 401 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ZNF239Q16600 458 aaKnown RBP10.38□□□□□ -0.75
VTA1-203ENST00000452973 AWAT2Q6E213 333 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 Q6ZTK2 550 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 GGNQ86UU5 652 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 OR51S1Q8NGJ8 323 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 GINS4Q9BRT9 223 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ZFP64Q9NPA5 681 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 DMXL1Q9Y485 3027 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 M0QYG6 137 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 NR2C1P13056 603 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 B4GALT1P15291 398 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ZNF84P51523 738 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 CLDN15P56746 228 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 SCAND1P57086 179 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 DCAF10Q5QP82 559 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ARMC10Q8N2F6 343 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ASCC1Q8N9N2 400 aaKnown RBP10.38□□□□□ -0.75
VTA1-203ENST00000452973 GJC3Q8NFK1 279 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 ACTR6Q9GZN1 396 aa10.38□□□□□ -0.75
VTA1-203ENST00000452973 RIF1Q5UIP0 2472 aaKnown RBP10.37□□□□□ -0.75
VTA1-203ENST00000452973 COL27A1Q8IZC6 1860 aaPredicted RBP10.37□□□□□ -0.75
VTA1-203ENST00000452973 NAP1L6A6NFF2 107 aa10.37□□□□□ -0.75
VTA1-203ENST00000452973 C1QBP02746 253 aa10.37□□□□□ -0.75
VTA1-203ENST00000452973 ERP29P30040 261 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms