RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SEMA6DQ8NFY4 1073 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 ZNF420Q8TAQ5 688 aaPredicted RBP10.85□□□□□ -0.67
CHD3-206ENST00000452447 SIGLEC11Q96RL6 698 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 PLA2G12AQ9BZM1 189 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 REEP1Q9H902 201 aa10.85□□□□□ -0.67
CHD3-206ENST00000452447 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.85□□□□□ -0.67
CHD3-206ENST00000452447 IGHV3-64DA0A0J9YX35 117 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 F5H5P2 479 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 H0YL77 283 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 M0R135 149 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 HLA-DPB1P04440 258 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 CALB2P22676 271 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 FPR2P25090 351 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 RASSF2P50749 326 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 HILS1P60008 231 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 FAM98BQ52LJ0 330 aaKnown RBP10.84□□□□□ -0.67
CHD3-206ENST00000452447 OR2T5Q6IEZ7 315 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 ZNF770Q6IQ21 691 aaPredicted RBP10.84□□□□□ -0.67
CHD3-206ENST00000452447 LCN8Q6JVE9 175 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 PGAP1Q75T13 922 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 NAA40Q86UY6 237 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 C1orf87Q8N0U7 546 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 OR51L1Q8NGJ5 315 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 OR4C15Q8NGM1 316 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 OR2T29Q8NH02 315 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 SPRYD4Q8WW59 207 aaPredicted RBP10.84□□□□□ -0.67
CHD3-206ENST00000452447 POP5Q969H6 163 aaKnown RBP10.84□□□□□ -0.67
CHD3-206ENST00000452447 SLCO4A1Q96BD0 722 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 ZNF799Q96GE5 643 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 MAP6Q96JE9 813 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 DDOQ99489 341 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 SUCNR1Q9BXA5 334 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 TSSK6Q9BXA6 273 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
CHD3-206ENST00000452447 MMP26Q9NRE1 261 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 SAMHD1Q9Y3Z3 626 aaKnown RBP10.84□□□□□ -0.67
CHD3-206ENST00000452447 U3KQV3 271 aa10.84□□□□□ -0.67
CHD3-206ENST00000452447 TENM1Q9UKZ4 2725 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 TCRBV5S2A0A599 114 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 TVP23AA6NH52 213 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 TRIM77I1YAP6 450 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 MLNRO43193 412 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 ATP5HO75947 161 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 CYB5R3P00387 301 aaPredicted RBP10.83□□□□□ -0.68
CHD3-206ENST00000452447 IRF2P14316 349 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 FMO3P31513 532 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 RPS27P42677 84 aaKnown RBP10.83□□□□□ -0.68
CHD3-206ENST00000452447 PRSS12P56730 875 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 SEC61A1P61619 476 aaKnown RBP10.83□□□□□ -0.68
CHD3-206ENST00000452447 MICAQ29983 383 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 C12orf54Q6X4T0 127 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 MRPL21Q7Z2W9 205 aaKnown RBP10.83□□□□□ -0.68
CHD3-206ENST00000452447 MOGAT3Q86VF5 341 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 LNX2Q8N448 690 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 SLC37A3Q8NCC5 494 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 OR2T33Q8NG76 320 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 OR8D4Q8NGM9 314 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 OR9Q1Q8NGQ5 310 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 LRGUKQ96M69 825 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 OR5V1Q9UGF6 321 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 OPN4Q9UHM6 478 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 BAIAP2Q9UQB8 552 aa10.83□□□□□ -0.68
CHD3-206ENST00000452447 POLR3KQ9Y2Y1 108 aaPredicted RBP10.83□□□□□ -0.68
CHD3-206ENST00000452447 CEACAM18A8MTB9 384 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 TRAPPC2LH3BP13 241 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ZNF205O95201 554 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 SOX14O95416 240 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 RPS2P15880 293 aaKnown RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 CPT2P23786 658 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 RAD23AP54725 363 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ACTG1P63261 375 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 MS4A2Q01362 244 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ZNF154Q13106 437 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 TAF13Q15543 124 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ARMCX4Q5H9R4 360 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ZNF362Q5T0B9 420 aaPredicted RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 DCXRQ7Z4W1 244 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 C22orf15Q8WYQ4 148 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 SLC6A7Q99884 636 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 COPS4Q9BT78 406 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 MRI1Q9BV20 369 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 TMEM165Q9HC07 324 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 DDX28Q9NUL7 540 aaKnown RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 LRCH1Q9Y2L9 728 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 NOP16Q9Y3C1 178 aaKnown RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 AUP1Q9Y679 476 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 A8MXK9 166 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 F5H0A9 414 aaPredicted RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 IFNGP01579 166 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 GYPBP06028 91 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 SPARCP09486 303 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 WNT2P09544 360 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 GATA4P43694 442 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ENTPD1P49961 510 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 CRMP1Q14194 572 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 ZNF181Q2M3W8 571 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 LYPD4Q6UWN0 246 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 RBMS3Q6XE24 437 aaKnown RBP10.82□□□□□ -0.68
CHD3-206ENST00000452447 CCDC121Q6ZUS5 278 aa10.82□□□□□ -0.68
CHD3-206ENST00000452447 CELF2-AS1Q8N7Q2 184 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms