RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 OR52N1Q8NH53 320 aa9.99□□□□□ -0.81
SCN9A-204ENST00000452182 TTTY10Q9BZA0 68 aa9.99□□□□□ -0.81
SCN9A-204ENST00000452182 ZNF442Q9H7R0 627 aa9.99□□□□□ -0.81
SCN9A-204ENST00000452182 R4GMQ9 66 aa9.99□□□□□ -0.81
SCN9A-204ENST00000452182 CADP27708 2225 aa9.99□□□□□ -0.81
SCN9A-204ENST00000452182 RTTNQ86VV8 2226 aa9.99□□□□□ -0.81
SCN9A-204ENST00000452182 CRYBG3Q68DQ2 2970 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 PKDREJQ9NTG1 2253 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 TMEM269A0A1B0GVZ9 245 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 MAGEB4O15481 346 aaPredicted RBP9.98□□□□□ -0.81
SCN9A-204ENST00000452182 NGFP01138 241 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 MT-ND5P03915 603 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 SLC6A9P48067 706 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 CHN2P52757 468 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 ZNF121P58317 390 aaPredicted RBP9.98□□□□□ -0.81
SCN9A-204ENST00000452182 RPS23P62266 143 aaKnown RBP9.98□□□□□ -0.81
SCN9A-204ENST00000452182 IRF3Q14653 427 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 ZNF672Q499Z4 452 aaPredicted RBP9.98□□□□□ -0.81
SCN9A-204ENST00000452182 TP53I3Q53FA7 332 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 FDX2Q6P4F2 183 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 TMPRSS11AQ6ZMR5 421 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 NAA40Q86UY6 237 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 KLHL36Q8N4N3 616 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 YIPF7Q8N8F6 280 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 KBTBD8Q8NFY9 601 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 OR52H1Q8NGJ2 320 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 OR5L1Q8NGL2 311 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 LILRB1Q8NHL6 650 aaPredicted RBP9.98□□□□□ -0.81
SCN9A-204ENST00000452182 SGCDQ92629 289 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 C4orf36Q96KX1 117 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 MOB1AQ9H8S9 216 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 CA10Q9NS85 328 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 ACOXLQ9NUZ1 547 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 FAM206AQ9NX38 181 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 ERVK-18Q9QC07 812 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 CLEC2DQ9UHP7 191 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 GNG8Q9UK08 70 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 ERGIC3Q9Y282 383 aa9.98□□□□□ -0.81
SCN9A-204ENST00000452182 H3BSA7 217 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 J3QLW9 94 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 TNFAIP8O95379 198 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 PLAUP00749 431 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 LCATP04180 440 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 HTR1AP08908 422 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 FAM157BP0CG42 384 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 ZNF19P17023 458 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 EEF1B2P24534 225 aaKnown RBP9.97□□□□□ -0.81
SCN9A-204ENST00000452182 TLE4Q04727 773 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 SNTB2Q13425 540 aaKnown RBP9.97□□□□□ -0.81
SCN9A-204ENST00000452182 RFPL4BQ6ZWI9 263 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 NANOGP1Q8N7R0 232 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 ZNF485Q8NCK3 441 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 OR1J1Q8NGS3 322 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 ABHD4Q8TB40 342 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 TMEM171Q8WVE6 324 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 RORBQ92753 470 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 PELI1Q96FA3 418 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 NR1H4Q96RI1 486 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-204ENST00000452182 ISG20L2Q9H9L3 353 aaKnown RBP9.97□□□□□ -0.81
SCN9A-204ENST00000452182 NUFIP1Q9UHK0 495 aaKnown RBP9.97□□□□□ -0.81
SCN9A-204ENST00000452182 ZNF391Q9UJN7 358 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 POU2F3Q9UKI9 436 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 SNX5Q9Y5X3 404 aa9.97□□□□□ -0.81
SCN9A-204ENST00000452182 HRNRQ86YZ3 2850 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-204ENST00000452182 RAI1Q7Z5J4 1906 aaPredicted RBP9.97□□□□□ -0.81
SCN9A-204ENST00000452182 A0A1W2PPR1 153 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 VSTM5A8MXK1 200 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 E7EQL1 145 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 MYL12BO14950 172 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 PNPP00491 289 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 MT-ND2P03891 347 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 ANXA2P07355 339 aaKnown RBP9.96□□□□□ -0.81
SCN9A-204ENST00000452182 ZNF250P15622 560 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 SSTR2P30874 369 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 CCR9P51686 369 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 PPP1CBP62140 327 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 CCDC58Q4VC31 144 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 OR2G6Q5TZ20 316 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 ZNF544Q6NX49 715 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 SPRYD4Q8WW59 207 aaPredicted RBP9.96□□□□□ -0.81
SCN9A-204ENST00000452182 ITFG2Q969R8 447 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 SPSB4Q96A44 273 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 MARS2Q96GW9 593 aaKnown RBP9.96□□□□□ -0.81
SCN9A-204ENST00000452182 MND1Q9BWT6 205 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 OR10A2Q9H208 303 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 CLEC4MQ9H2X3 399 aaPredicted RBP9.96□□□□□ -0.81
SCN9A-204ENST00000452182 RGCCQ9H4X1 137 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 G6PC2Q9NQR9 355 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 BABAM2Q9NXR7 383 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 CISD1Q9NZ45 108 aaKnown RBP9.96□□□□□ -0.81
SCN9A-204ENST00000452182 STARD10Q9Y365 291 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 ATP23Q9Y6H3 246 aa9.96□□□□□ -0.81
SCN9A-204ENST00000452182 A0A0U1RQV5 110 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 LOC110117498-PIK3R3F6TDL0 507 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 HS3ST1O14792 307 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 XRCC2O43543 280 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 GPRIN2O60269 458 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 RPP14O95059 124 aaKnown RBP9.96□□□□□ -0.82
SCN9A-204ENST00000452182 SLC2A1P11166 492 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 THBS4P35443 961 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms