RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PDP1Q9P0J1 537 aaPredicted RBP8.18□□□□□ -1.1
USP54-207ENST00000451492 CYB5R1Q9UHQ9 305 aa8.18□□□□□ -1.1
USP54-207ENST00000451492 KLHL21Q9UJP4 597 aa8.18□□□□□ -1.1
USP54-207ENST00000451492 TRAV20A0A0B4J274 112 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 RIIAD1A6NNX1 92 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 ACOT8O14734 319 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 SURF4O15260 269 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 TBX1O43435 398 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 DEAF1O75398 565 aaPredicted RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 CYB5R3P00387 301 aaPredicted RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 IFNGP01579 166 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 IGHV2-70P01814 119 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 ZNF3P17036 446 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 FMO3P31513 532 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 ENTPD1P49961 510 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 MMP16P51512 607 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 PRKXP51817 358 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 TPTEP56180 551 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 SEC61A1P61619 476 aaKnown RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 CBX1P83916 185 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 MALLQ13021 153 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 EIF2B1Q14232 305 aaKnown RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 GK2Q14410 553 aaPredicted RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 TAF13Q15543 124 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 RSPO1Q2MKA7 263 aaPredicted RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 GFOD2Q3B7J2 385 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 SNAI3Q3KNW1 292 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 DNAL1Q4LDG9 190 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 DCAF12L2Q5VW00 463 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 PRAMEF6Q5VXH4 476 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 FBXW12Q6X9E4 464 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 PGAP1Q75T13 922 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 MRPL21Q7Z2W9 205 aaKnown RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 MOGAT3Q86VF5 341 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 ERI1Q8IV48 349 aaKnown RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 C19orf18Q8NEA5 215 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 SPTSSAQ969W0 71 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 SLAMF6Q96DU3 332 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 MEGF10Q96KG7 1140 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 RBM4Q9BWF3 364 aaKnown RBP8.17□□□□□ -1.1
USP54-207ENST00000451492 C1QTNF5Q9BXJ0 243 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 DGCR6LQ9BY27 220 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 DNAJC27Q9NZQ0 273 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 KIF17Q9P2E2 1029 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 IL19Q9UHD0 177 aa8.17□□□□□ -1.1
USP54-207ENST00000451492 A0A0G2JMP0 313 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 A0A0X1KG70 313 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 C5orf63A6NC05 138 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 IQCF6A8MYZ5 107 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 J3QW42 95 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 ZNF593O00488 134 aaPredicted RBP8.16□□□□□ -1.1
USP54-207ENST00000451492 TCF21O43680 179 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 AVPP01185 164 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 ANPEPP15144 967 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 PRKACGP22612 351 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 TUBG1P23258 451 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 HSD11B1P28845 292 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 RAD23AP54725 363 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 BTG1P62324 171 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 HOXA4Q00056 320 aaPredicted RBP8.16□□□□□ -1.1
USP54-207ENST00000451492 ECH1Q13011 328 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 ZMYND11Q15326 602 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 ZNF362Q5T0B9 420 aaPredicted RBP8.16□□□□□ -1.1
USP54-207ENST00000451492 OR4M2Q8NGB6 313 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 OR13G1Q8NGZ3 307 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 SPRYD4Q8WW59 207 aaPredicted RBP8.16□□□□□ -1.1
USP54-207ENST00000451492 SLC7A6OSQ96CW6 309 aaPredicted RBP8.16□□□□□ -1.1
USP54-207ENST00000451492 ZMYND19Q96E35 227 aaPredicted RBP8.16□□□□□ -1.1
USP54-207ENST00000451492 DDOQ99489 341 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 ADAT1Q9BUB4 502 aaKnown RBP8.16□□□□□ -1.1
USP54-207ENST00000451492 C19orf24Q9BVV8 132 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 OR51V1Q9H2C8 321 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 GCM1Q9NP62 436 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 BRD7Q9NPI1 651 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 G6PC2Q9NQR9 355 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 TUBG2Q9NRH3 451 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 UFSP2Q9NUQ7 469 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 TMEM100Q9NV29 134 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 KCNG2Q9UJ96 466 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 METRNQ9UJH8 293 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 BAIAP2Q9UQB8 552 aa8.16□□□□□ -1.1
USP54-207ENST00000451492 ANK2Q01484 3957 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 GGT3PA6NGU5 568 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 AQP12BA6NM10 295 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 ZNF878C9JN71 531 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 FKBP6O75344 327 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.1
USP54-207ENST00000451492 ANXA2P07355 339 aaKnown RBP8.15□□□□□ -1.1
USP54-207ENST00000451492 CA6P23280 308 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 ZFP36P26651 326 aaKnown RBP8.15□□□□□ -1.1
USP54-207ENST00000451492 GRK5P34947 590 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 CX3CR1P49238 355 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 SRP9P49458 86 aaKnown RBP8.15□□□□□ -1.1
USP54-207ENST00000451492 RPS7P62081 194 aaKnown RBP8.15□□□□□ -1.1
USP54-207ENST00000451492 ZNF92Q03936 586 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 OR8G1Q15617 311 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 KRTAP27-1Q3LI81 207 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 KLHL12Q53G59 568 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 FAM201AQ5SY85 155 aa8.15□□□□□ -1.1
USP54-207ENST00000451492 GLYATL3Q5SZD4 288 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms