RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ABCB10Q9NRK6 738 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 TAS2R4Q9NYW5 299 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 PRSS50Q9UI38 385 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 BSNQ9UPA5 3926 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 CACNA1GO43497 2377 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 A0A0U1RQV5 110 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 ISPDA4D126 451 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FAM25AB3EWG3 89 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FAM25CB3EWG5 89 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FAM25GB3EWG6 89 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 APOA1P02647 267 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 DBHP09172 617 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FOXG1P55316 489 aaPredicted RBP12.47□□□□□ -0.41
USP39-207ENST00000450066 TPTEP56180 551 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
USP39-207ENST00000450066 C9orf135Q5VTT2 229 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FAM214BQ7L5A3 538 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 LYSMD2Q8IV50 215 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 SERPINA12Q8IW75 414 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 GDPD1Q8N9F7 314 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 DNAAF1Q8NEP3 725 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 OR5H6Q8NGV6 325 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 AKR7LQ8NHP1 331 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FGGYQ96C11 551 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 PPP1R3EQ9H7J1 279 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 LIN7BQ9HAP6 207 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 ATPIF1Q9UII2 106 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 RAXQ9Y2V3 346 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 FREM1Q5H8C1 2179 aa12.47□□□□□ -0.41
USP39-207ENST00000450066 A0A0B4J203 849 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 MEGF11A6BM72 1044 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 LMX1BO60663 402 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 IGLV3-1P01715 115 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 EIF4EP06730 217 aaKnown RBP12.46□□□□□ -0.41
USP39-207ENST00000450066 CALCBP10092 127 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 CD37P11049 281 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 ANOS1P23352 680 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 MPGP29372 298 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 TALDO1P37837 337 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 SF3B4Q15427 424 aaKnown RBP eCLIP12.46□□□□□ -0.413e-14■■■■■ 33.9
USP39-207ENST00000450066 STEAP3Q658P3 488 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 OR2A2Q6IF42 318 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 DOK3Q7L591 496 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 OR52H1Q8NGJ2 320 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 OR1J2Q8NGS2 313 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 SNRNP27Q8WVK2 155 aaKnown RBP12.46□□□□□ -0.41
USP39-207ENST00000450066 ZNF224Q9NZL3 707 aa12.46□□□□□ -0.41
USP39-207ENST00000450066 A0A096LPE4 126 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 A0A1W2PPZ6 126 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 E9PLN8 166 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 HTR5AP47898 357 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 SCAND1P57086 179 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 RIN1Q13671 783 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 KRTCAP3Q53RY4 240 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 NSUN5P2Q63ZY6 315 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 PLPP7Q8NBV4 271 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 OR5D14Q8NGL3 314 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 LGALS14Q8TCE9 139 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 CHPT1Q8WUD6 406 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 EXTL2Q9UBQ6 330 aa12.46□□□□□ -0.42
USP39-207ENST00000450066 IGF2RP11717 2491 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 MED12LQ86YW9 2145 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 A0A1B0GVG6 124 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 IL18BPO95998 194 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 DDOSTP39656 456 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 IL18Q14116 193 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 PABPC1L2AQ5JQF8 200 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 GLT8D1Q68CQ7 371 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 ZNF585AQ6P3V2 769 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 ANKRD16Q6P6B7 361 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 FAM180AQ6UWF9 173 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 GCNT2Q8N0V5 402 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 C9orf106Q8NAJ2 232 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 ADAT3Q96EY9 351 aaPredicted RBP12.45□□□□□ -0.42
USP39-207ENST00000450066 OR10A2Q9H208 303 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 RNF121Q9H920 327 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 SP140LQ9H930 580 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 LUZP4Q9P127 313 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 STEAP1Q9UHE8 339 aa12.45□□□□□ -0.42
USP39-207ENST00000450066 PIEZO2Q9H5I5 2752 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 CNOT4O95628 575 aaKnown RBP12.44□□□□□ -0.42
USP39-207ENST00000450066 ADRB1P08588 477 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 ITGA5P08648 1049 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 AZGP1P25311 298 aaKnown RBP12.44□□□□□ -0.42
USP39-207ENST00000450066 GNALP38405 381 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 GFOD2Q3B7J2 385 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 PYDC2Q56P42 97 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 UBE2NLQ5JXB2 153 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 SFRP5Q5T4F7 317 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 ZNF529Q6P280 563 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 TFAP2EQ6VUC0 442 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 DPPA2Q7Z7J5 298 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 OR8H2Q8N162 312 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 NKAIN3Q8N8D7 197 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 CCDC54Q8NEL0 328 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 OR4M1Q8NGD0 313 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 FAM71F1Q96KD3 344 aaPredicted RBP12.44□□□□□ -0.42
USP39-207ENST00000450066 LYZL4Q96KX0 146 aa12.44□□□□□ -0.42
USP39-207ENST00000450066 C14orf119Q9NWQ9 140 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms