RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 RPS2P15880 293 aaKnown RBP11.49□□□□□ -0.57
TOM1-211ENST00000449508 CPT2P23786 658 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 GGT2P36268 569 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 TPTEP56180 551 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 TRAP1Q12931 704 aaKnown RBP11.49□□□□□ -0.57
TOM1-211ENST00000449508 KRTAP27-1Q3LI81 207 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 ZNF620Q6ZNG0 422 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 PGAP1Q75T13 922 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 C1orf87Q8N0U7 546 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 SIGLECL1Q8N7X8 197 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 CYB561A3Q8NBI2 242 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 OR52L1Q8NGH7 329 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 TMEM246Q9BRR3 403 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 SSBP3Q9BWW4 388 aaPredicted RBP11.49□□□□□ -0.57
TOM1-211ENST00000449508 PLA2G12AQ9BZM1 189 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 PNRC2Q9NPJ4 139 aaKnown RBP11.49□□□□□ -0.57
TOM1-211ENST00000449508 MRPL22Q9NWU5 206 aaKnown RBP11.49□□□□□ -0.57
TOM1-211ENST00000449508 NDE1Q9NXR1 346 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 ZNF69Q9UC07 566 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 ARL2BPQ9Y2Y0 163 aa11.49□□□□□ -0.57
TOM1-211ENST00000449508 TVP23AA6NH52 213 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 TNFRSF11BO00300 401 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 IRF2P14316 349 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 PYCR1P32322 319 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 CD80P33681 288 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 PMELP40967 661 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 HMGA2P52926 109 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 GYS2P54840 703 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 GNB2P62879 340 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 UBA52P62987 128 aaKnown RBP11.48□□□□□ -0.57
TOM1-211ENST00000449508 PAX8Q06710 450 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 MAB21L1Q13394 359 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 ZNF181Q2M3W8 571 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 SPATS1Q496A3 300 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
TOM1-211ENST00000449508 FAM201AQ5SY85 155 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 RPL13AP3Q6NVV1 102 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 CYP2R1Q6VVX0 501 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 KLBQ86Z14 1044 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 BCL6BQ8N143 479 aaPredicted RBP11.48□□□□□ -0.57
TOM1-211ENST00000449508 LINC00471Q8N535 108 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 PROKR2Q8NFJ6 384 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 SPRYD4Q8WW59 207 aaPredicted RBP11.48□□□□□ -0.57
TOM1-211ENST00000449508 SPTSSAQ969W0 71 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 NEIL1Q96FI4 390 aaPredicted RBP11.48□□□□□ -0.57
TOM1-211ENST00000449508 PLEKHA8Q96JA3 519 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 MAP6Q96JE9 813 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 KCNG2Q9UJ96 466 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 LYVE1Q9Y5Y7 322 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 CDH10Q9Y6N8 788 aa11.48□□□□□ -0.57
TOM1-211ENST00000449508 A0A1B0GWJ7 208 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 M0R135 149 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 BHLHE40O14503 412 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 DCTN3O75935 186 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 GASTP01350 101 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 RPS27P42677 84 aaKnown RBP11.47□□□□□ -0.57
TOM1-211ENST00000449508 GATA4P43694 442 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 RAD23AP54725 363 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 GNGT1P63211 74 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 PPP1R8Q12972 351 aaKnown RBP11.47□□□□□ -0.57
TOM1-211ENST00000449508 BTNL3Q6UXE8 466 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 LRRN1Q6UXK5 716 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 DOK3Q7L591 496 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 MRPL21Q7Z2W9 205 aaKnown RBP11.47□□□□□ -0.57
TOM1-211ENST00000449508 PIGWQ7Z7B1 504 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 CELF2-AS1Q8N7Q2 184 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 OR9Q2Q8NGE9 314 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 OR8B3Q8NGG8 313 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 OR51L1Q8NGJ5 315 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 OR11L1Q8NGX0 322 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 OR2T4Q8NH00 348 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 ERGIC1Q969X5 290 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 ZNF799Q96GE5 643 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 OR8B2Q96RD0 313 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 DDOQ99489 341 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 BTBD10Q9BSF8 475 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 TRIM15Q9C019 465 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 MS4A7Q9GZW8 240 aaPredicted RBP11.47□□□□□ -0.57
TOM1-211ENST00000449508 UFSP2Q9NUQ7 469 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 IL20Q9NYY1 176 aa11.47□□□□□ -0.57
TOM1-211ENST00000449508 FSTL3O95633 263 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 CA6P23280 308 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 PRTN3P24158 256 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 MNAT1P51948 309 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 PAX2Q02962 417 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 BAMBIQ13145 260 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 OR8G1Q15617 311 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 ZNF404Q494X3 552 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 ZNF362Q5T0B9 420 aaPredicted RBP11.46□□□□□ -0.57
TOM1-211ENST00000449508 PRAMEF6Q5VXH4 476 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 RASSF6Q6ZTQ3 369 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 NLRC3Q7RTR2 1065 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 OR10S1Q8NGN2 331 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 OR9Q1Q8NGQ5 310 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 ZNRF4Q8WWF5 429 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 RAB40AQ8WXH6 277 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 ZMYND19Q96E35 227 aaPredicted RBP11.46□□□□□ -0.57
TOM1-211ENST00000449508 DUX5Q96PT3 197 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 SLC22A4Q9H015 551 aa11.46□□□□□ -0.57
TOM1-211ENST00000449508 ACTR3BQ9P1U1 418 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms