RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 F5H5K5 113 aa16.74■□□□□ 0.27
RPS28-202ENST00000449223 UBCP0CG48 685 aaKnown RBP16.74■□□□□ 0.27
RPS28-202ENST00000449223 APEX1P27695 318 aaKnown RBP16.74■□□□□ 0.27
RPS28-202ENST00000449223 FGF9P31371 208 aaPredicted RBP16.74■□□□□ 0.27
RPS28-202ENST00000449223 HGFACQ04756 655 aa16.74■□□□□ 0.27
RPS28-202ENST00000449223 SLC3A1Q07837 685 aa16.74■□□□□ 0.27
RPS28-202ENST00000449223 ZNF704Q6ZNC4 412 aaPredicted RBP16.74■□□□□ 0.27
RPS28-202ENST00000449223 SLC7A6Q92536 515 aa16.74■□□□□ 0.27
RPS28-202ENST00000449223 ACTR6Q9GZN1 396 aa16.74■□□□□ 0.27
RPS28-202ENST00000449223 PBOV1Q9GZY1 135 aa16.74■□□□□ 0.27
RPS28-202ENST00000449223 NAA50Q9GZZ1 169 aaKnown RBP16.74■□□□□ 0.27
RPS28-202ENST00000449223 COMMD4Q9H0A8 199 aa16.74■□□□□ 0.27
RPS28-202ENST00000449223 SP140LQ9H930 580 aa16.74■□□□□ 0.27
RPS28-202ENST00000449223 ZNF462Q96JM2 2506 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 A0A0U1RQV5 110 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 TRDV1A0A1B0GX56 115 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 AIREO43918 545 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 IGLV3-1P01715 115 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 TTRP02766 147 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 BCL2L15Q5TBC7 163 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 OR52H1Q8NGJ2 320 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 RGP1Q92546 391 aaPredicted RBP16.73■□□□□ 0.27
RPS28-202ENST00000449223 C1QTNF5Q9BXJ0 243 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 OR51E2Q9H255 320 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 SLC22A13Q9Y226 551 aa16.73■□□□□ 0.27
RPS28-202ENST00000449223 TRIM64BA6NI03 449 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 J3QW42 95 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 GPX5O75715 221 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 SERPINA3P01011 423 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 PPP3CBP16298 524 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 APLNRP35414 380 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 FABP5Q01469 135 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 TAB1Q15750 504 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 SEZ6L2Q6UXD5 910 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 TMEM91Q6ZNR0 172 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 SLC30A7Q8NEW0 376 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 TMED9Q9BVK6 235 aa16.72■□□□□ 0.27
RPS28-202ENST00000449223 RSL24D1Q9UHA3 163 aaKnown RBP16.72■□□□□ 0.27
RPS28-202ENST00000449223 TRBV5-5A0A0J9YX44 114 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 A0A1W2PR80 420 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 CCL1P22362 96 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 SLC6A9P48067 706 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 TMEM244Q5VVB8 128 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 Q6ZSR3 168 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 NAA40Q86UY6 237 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 ZNF676Q8N7Q3 588 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 OR8B12Q8NGG6 310 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 CA5BP1Q8WTZ4 195 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 PHYHIPQ92561 330 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 THRSPQ92748 146 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 RPL3LQ92901 407 aaKnown RBP16.71■□□□□ 0.27
RPS28-202ENST00000449223 RNASE6Q93091 150 aaKnown RBP16.71■□□□□ 0.27
RPS28-202ENST00000449223 TMEM203Q969S6 136 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 PPP1R14AQ96A00 147 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 MUCL1Q96DR8 90 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 MS4A3Q96HJ5 214 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 ZNF319Q9P2F9 582 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 ZNF391Q9UJN7 358 aa16.71■□□□□ 0.27
RPS28-202ENST00000449223 C5orf49A4QMS7 147 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 H3BMQ9 156 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 GABRPO00591 440 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 GATBO75879 557 aaKnown RBP16.7■□□□□ 0.26
RPS28-202ENST00000449223 RGS9O75916 674 aaPredicted RBP16.7■□□□□ 0.26
RPS28-202ENST00000449223 ANXA2P07355 339 aaKnown RBP16.7■□□□□ 0.26
RPS28-202ENST00000449223 ACHEP22303 614 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 SORDQ00796 357 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 PPA1Q15181 289 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 TBC1D28Q2M2D7 210 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 XKRXQ6PP77 449 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 UNQ9370/PRO34162Q6UXP9 181 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 MYPOPQ86VE0 399 aaPredicted RBP16.7■□□□□ 0.26
RPS28-202ENST00000449223 ZNF808Q8N4W9 903 aaPredicted RBP16.7■□□□□ 0.26
RPS28-202ENST00000449223 OR1J2Q8NGS2 313 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 ABHD4Q8TB40 342 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 GPR148Q8TDV2 347 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 TRMT61AQ96FX7 289 aaKnown RBP16.7■□□□□ 0.26
RPS28-202ENST00000449223 SSR3Q9UNL2 185 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 GTF2A1LQ9UNN4 478 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 PRR14LQ5THK1 2151 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 SLC2A1P11166 492 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 ANOS1P23352 680 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 IDH3GP51553 393 aaPredicted RBP16.7■□□□□ 0.26
RPS28-202ENST00000449223 TFF3Q07654 80 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 Q499Y3 187 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 FAM57BQ71RH2 274 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 PLPP7Q8NBV4 271 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 LRRC46Q96FV0 321 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 PGAM5Q96HS1 289 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 CHCHD6Q9BRQ6 235 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 CENPOQ9BU64 300 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 RGCCQ9H4X1 137 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 BRD7Q9NPI1 651 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 TBCCD1Q9NVR7 557 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 TXNL4BQ9NX01 149 aaKnown RBP16.7■□□□□ 0.26
RPS28-202ENST00000449223 HHLA2Q9UM44 414 aa16.7■□□□□ 0.26
RPS28-202ENST00000449223 ADGRG4Q8IZF6 3080 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 A0A1B0GTI1 187 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 LOC107986453A0A1B0GWG9 222 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 SLC22A1O15245 554 aa16.69■□□□□ 0.26
RPS28-202ENST00000449223 NOL3O60936 208 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms