RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 RNF224P0DH78 156 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 CCL2P13500 99 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 PCSK6P29122 969 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF83P51522 516 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 GPR50Q13585 617 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 COLCA1Q6ZS62 124 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF554Q86TJ5 538 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 PAQR4Q8N4S7 273 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-203ENST00000449049 ZFP41Q8N8Y5 198 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 UFD1Q92890 307 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 SMIM19Q96E16 107 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 NUFIP1Q9UHK0 495 aaKnown RBP12.17□□□□□ -0.46
SHMT2-203ENST00000449049 CEPT1Q9Y6K0 416 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 J3QKU1 62 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF35P13682 527 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 CELP19835 753 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 ANOS1P23352 680 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 LIPAP38571 399 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 KIR3DL2P43630 455 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 SLC6A9P48067 706 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 TSTQ16762 297 aaKnown RBP12.17□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF544Q6NX49 715 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 CLEC18BQ6UXF7 455 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 WFDC8Q8IUA0 241 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 ZC3HAV1LQ96H79 300 aaKnown RBP12.17□□□□□ -0.46
SHMT2-203ENST00000449049 PGLYRP3Q96LB9 341 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 C1QTNF5Q9BXJ0 243 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 PBOV1Q9GZY1 135 aa12.17□□□□□ -0.46
SHMT2-203ENST00000449049 TRBV2A0A0J9YWF9 115 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 OR4C45A6NMZ5 311 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 H3BSA7 217 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 M0R1B8 84 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 ANXA2P07355 339 aaKnown RBP12.16□□□□□ -0.46
SHMT2-203ENST00000449049 SLC2A1P11166 492 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 CCNOP22674 350 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 WNT5AP41221 380 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 NAAAQ02083 359 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 SSX1Q16384 188 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 BCL2L15Q5TBC7 163 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 LIPKQ5VXJ0 399 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 PHC2Q8IXK0 858 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 ELMOD2Q8IZ81 293 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 OR13F1Q8NGS4 319 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 LINC01560Q8TB33 94 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 ARPC5LQ9BPX5 153 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 SP140LQ9H930 580 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 CDH20Q9HBT6 801 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 BRD7Q9NPI1 651 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 SLC22A13Q9Y226 551 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 HIVEP3Q5T1R4 2406 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 RP1L1Q8IWN7 2480 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-203ENST00000449049 TUBAL3A6NHL2 446 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 CCRL2O00421 344 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 TTRP02766 147 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 EPXP11678 715 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 RGS6P49758 472 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 SNTB1Q13884 538 aaKnown RBP12.16□□□□□ -0.46
SHMT2-203ENST00000449049 ALKBH2Q6NS38 261 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 ARL9Q6T311 187 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 FAM57BQ71RH2 274 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 OR8B12Q8NGG6 310 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 OR52H1Q8NGJ2 320 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 PPP1R14AQ96A00 147 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 TMIGD2Q96BF3 282 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 DACH2Q96NX9 599 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 NGBQ9NPG2 151 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 TBCCD1Q9NVR7 557 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 NDUFB11Q9NX14 153 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 ZNF319Q9P2F9 582 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 GTF2A1LQ9UNN4 478 aa12.16□□□□□ -0.46
SHMT2-203ENST00000449049 IGHV2OR16-5A0A0B4J2B6 119 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 PNMA8CA0A1B0GUJ8 204 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 TMEM212A6NML5 194 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 J3QW42 95 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 ZFPL1O95159 310 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 LCATP04180 440 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 IGFBP2P18065 325 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 CD53P19397 219 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 CD40P25942 277 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 TGFBR2P37173 567 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 SNAI3Q3KNW1 292 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 TMEM108Q6UXF1 575 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 CROCCP3Q8IVE0 287 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 SSC4DQ8WTU2 575 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
SHMT2-203ENST00000449049 SF3B6Q9Y3B4 125 aaKnown RBP12.15□□□□□ -0.46
SHMT2-203ENST00000449049 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 C5orf63A6NC05 138 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 C19orf84I3L1E1 186 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 IGLV3-1P01715 115 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
SHMT2-203ENST00000449049 NAT1P18440 290 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 PTAFRP25105 342 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 CALCRP30988 508 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 SLC3A1Q07837 685 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 ZNF101Q8IZC7 436 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 OR5AK2Q8NH90 309 aa12.14□□□□□ -0.47
SHMT2-203ENST00000449049 GHSRQ92847 366 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms