RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 TIMM23O14925 209 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 MLNRO43193 412 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 GMDSO60547 372 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 TOX4O94842 621 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 HLA-DQA2P01906 255 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 HLA-DPB1P04440 258 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 FUT4P22083 530 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 NOS3P29474 1203 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 RAG2P55895 527 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 TPTEP56180 551 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.64
HMGB3-204ENST00000448905 MZT1Q08AG7 82 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 COX10Q12887 443 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 OR8G1Q15617 311 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 OTPQ5XKR4 325 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 OLFML2AQ68BL7 652 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 FIP1L1Q6UN15 594 aaKnown RBP11.08□□□□□ -0.64
HMGB3-204ENST00000448905 ZNF620Q6ZNG0 422 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 FITM2Q8N6M3 262 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 SPERTQ8NA61 448 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 SSMEM1Q8WWF3 244 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 GATAD2BQ8WXI9 593 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 TAF15Q92804 592 aaKnown RBP eCLIP11.08□□□□□ -0.64
HMGB3-204ENST00000448905 SPTSSAQ969W0 71 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 SLCO4A1Q96BD0 722 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 RCN3Q96D15 328 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 RSRC1Q96IZ7 334 aaKnown RBP11.08□□□□□ -0.64
HMGB3-204ENST00000448905 TECTBQ96PL2 329 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 ERMAPQ96PL5 475 aaPredicted RBP11.08□□□□□ -0.64
HMGB3-204ENST00000448905 MMADHCQ9H3L0 296 aaPredicted RBP11.08□□□□□ -0.64
HMGB3-204ENST00000448905 RNF7Q9UBF6 113 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 SOX21Q9Y651 276 aaPredicted RBP11.08□□□□□ -0.64
HMGB3-204ENST00000448905 POMT1Q9Y6A1 747 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 MGAM2Q2M2H8 2515 aa11.08□□□□□ -0.64
HMGB3-204ENST00000448905 CLPSL1A2RUU4 121 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 ZNF879B4DU55 563 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 CCDC22O60826 627 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 NDUFA7O95182 113 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 GGT2P36268 569 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 PSMB10P40306 273 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 PMELP40967 661 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 CD200P41217 278 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 SF3A3Q12874 501 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGB3-204ENST00000448905 MAB21L1Q13394 359 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 GK2Q14410 553 aaPredicted RBP11.07□□□□□ -0.64
HMGB3-204ENST00000448905 RFX4Q33E94 735 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 C11orf91Q3C1V1 193 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 FAM201AQ5SY85 155 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 METTL11BQ5VVY1 283 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 CORO6Q6QEF8 472 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 LYPD2Q6UXB3 125 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 MRPL21Q7Z2W9 205 aaKnown RBP11.07□□□□□ -0.64
HMGB3-204ENST00000448905 TSEN54Q7Z6J9 526 aaKnown RBP11.07□□□□□ -0.64
HMGB3-204ENST00000448905 DACT3Q96B18 629 aaPredicted RBP11.07□□□□□ -0.64
HMGB3-204ENST00000448905 TSSK2Q96PF2 358 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 ATF6BQ99941 703 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 KCTD14Q9BQ13 255 aaPredicted RBP11.07□□□□□ -0.64
HMGB3-204ENST00000448905 NSRP1Q9H0G5 558 aaKnown RBP11.07□□□□□ -0.64
HMGB3-204ENST00000448905 UFSP2Q9NUQ7 469 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 FGFR1OP2Q9NVK5 253 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 LHFPL6Q9Y693 200 aa11.07□□□□□ -0.64
HMGB3-204ENST00000448905 TRAV38-1A0A0B4J264 116 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 MDFIC2A0A1B0GVS7 189 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 LGALS8O00214 317 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 TNFRSF13BO14836 293 aaPredicted RBP11.06□□□□□ -0.64
HMGB3-204ENST00000448905 IDH3BO43837 385 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 FAM20BO75063 409 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 ECDO95905 644 aaPredicted RBP11.06□□□□□ -0.64
HMGB3-204ENST00000448905 ACSM4P0C7M7 580 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 ZNF823P16415 610 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 CA6P23280 308 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 SLC6A6P31641 620 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 IFNGR2P38484 337 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 OMPP47874 163 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 SLC7A2P52569 658 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 OR8B8Q15620 311 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 MEP1BQ16820 701 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 RSPO1Q2MKA7 263 aaPredicted RBP11.06□□□□□ -0.64
HMGB3-204ENST00000448905 BRICD5Q6PL45 260 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 ZNF841Q6ZN19 808 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 PTCHD4Q6ZW05 846 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 OR6V1Q8N148 313 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 BOLLQ8N9W6 283 aaKnown RBP11.06□□□□□ -0.64
HMGB3-204ENST00000448905 OR52J3Q8NH60 311 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 DYRK2Q92630 601 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 NMNAT3Q96T66 252 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 MARCH7Q9H992 704 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 ACOXLQ9NUZ1 547 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 NDUFAF4Q9P032 175 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 KCNG2Q9UJ96 466 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 TMCC3Q9ULS5 477 aa11.06□□□□□ -0.64
HMGB3-204ENST00000448905 SAMD4AQ9UPU9 718 aaKnown RBP11.06□□□□□ -0.64
HMGB3-204ENST00000448905 IGLV1-36A0A0B4J1U3 117 aa11.05□□□□□ -0.64
HMGB3-204ENST00000448905 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.05□□□□□ -0.64
HMGB3-204ENST00000448905 GGT3PA6NGU5 568 aa11.05□□□□□ -0.64
HMGB3-204ENST00000448905 ARPC3O15145 178 aa11.05□□□□□ -0.64
HMGB3-204ENST00000448905 ADAM20O43506 726 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms