RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ZMAT3Q9HA38 289 aaKnown RBP23.63■■□□□ 1.37
CBX4-202ENST00000448310 PNRC2Q9NPJ4 139 aaKnown RBP23.63■■□□□ 1.37
CBX4-202ENST00000448310 TRAV40A0A0B4J280 105 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 A0A1B0GWJ7 208 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 OR6C68A6NDL8 312 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 HLA-DQA2P01906 255 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 LCATP04180 440 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 NOS3P29474 1203 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 SMIM11AP58511 58 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 HOXA4Q00056 320 aaPredicted RBP23.62■■□□□ 1.37
CBX4-202ENST00000448310 SLC36A3Q495N2 470 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 PRAMEF6Q5VXH4 476 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 LYPD2Q6UXB3 125 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 ZBTB46Q86UZ6 589 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 C1orf87Q8N0U7 546 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 OR8B3Q8NGG8 313 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 OR2AJ1Q8NGZ0 328 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 SLCO4A1Q96BD0 722 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 UPRTQ96BW1 309 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 PLEKHA8Q96JA3 519 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 OR8B2Q96RD0 313 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 CYB5R1Q9UHQ9 305 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 MEGF8Q7Z7M0 2845 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 TRRAPQ9Y4A5 3859 aa23.62■■□□□ 1.37
CBX4-202ENST00000448310 MDFIC2A0A1B0GVS7 189 aa23.61■■□□□ 1.37
CBX4-202ENST00000448310 RNASE1P07998 156 aaKnown RBP23.61■■□□□ 1.37
CBX4-202ENST00000448310 CPT2P23786 658 aa23.61■■□□□ 1.37
CBX4-202ENST00000448310 MSX2P35548 267 aaPredicted RBP23.61■■□□□ 1.37
CBX4-202ENST00000448310 GGT2P36268 569 aa23.61■■□□□ 1.37
CBX4-202ENST00000448310 PITPNBP48739 271 aa23.61■■□□□ 1.37
CBX4-202ENST00000448310 TRAP1Q12931 704 aaKnown RBP23.61■■□□□ 1.37
CBX4-202ENST00000448310 SLC9A3R2Q15599 337 aa23.61■■□□□ 1.37
CBX4-202ENST00000448310 SLC35F1Q5T1Q4 408 aa23.61■■□□□ 1.37
CBX4-202ENST00000448310 SHISA2Q6UWI4 295 aa23.61■■□□□ 1.37
CBX4-202ENST00000448310 UFSP2Q9NUQ7 469 aa23.61■■□□□ 1.37
CBX4-202ENST00000448310 MRPL22Q9NWU5 206 aaKnown RBP23.61■■□□□ 1.37
CBX4-202ENST00000448310 PPIAL4GP0DN37 164 aa23.6■■□□□ 1.37
CBX4-202ENST00000448310 PRDX6P30041 224 aa23.6■■□□□ 1.37
CBX4-202ENST00000448310 GATA4P43694 442 aa23.6■■□□□ 1.37
CBX4-202ENST00000448310 ECH1Q13011 328 aa23.6■■□□□ 1.37
CBX4-202ENST00000448310 NLRC3Q7RTR2 1065 aa23.6■■□□□ 1.37
CBX4-202ENST00000448310 SLC25A28Q96A46 364 aa23.6■■□□□ 1.37
CBX4-202ENST00000448310 NUDT16L1Q9BRJ7 211 aaKnown RBP23.6■■□□□ 1.37
CBX4-202ENST00000448310 FAM20BO75063 409 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 PLATP00750 562 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 IRF2P14316 349 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 RRM2P31350 389 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 RPS27P42677 84 aaKnown RBP23.59■■□□□ 1.37
CBX4-202ENST00000448310 MTNR1AP48039 350 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 GSSP48637 474 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 MALLQ13021 153 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 MPPED2Q15777 294 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 C9orf139Q6ZV77 190 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 PGAP1Q75T13 922 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 MAP6Q96JE9 813 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 FAM107BQ9H098 131 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 UNKLQ9H9P5 680 aaKnown RBP23.59■■□□□ 1.37
CBX4-202ENST00000448310 CLN8Q9UBY8 286 aa23.59■■□□□ 1.37
CBX4-202ENST00000448310 KIR2DS1A0A191URI9 304 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 FSTL3O95633 263 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 ANOS1P23352 680 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 PYCR1P32322 319 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 RAD23AP54725 363 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.58■■□□□ 1.37
CBX4-202ENST00000448310 CLEC12AQ5QGZ9 265 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 PRR31Q5SQ13 230 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 ZNF620Q6ZNG0 422 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 MRPL21Q7Z2W9 205 aaKnown RBP23.58■■□□□ 1.37
CBX4-202ENST00000448310 OR10S1Q8NGN2 331 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 OR11L1Q8NGX0 322 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 SPRYD4Q8WW59 207 aaPredicted RBP23.58■■□□□ 1.37
CBX4-202ENST00000448310 MCUR1Q96AQ8 359 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 EGLN3Q9H6Z9 239 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 MED4Q9NPJ6 270 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 MAGEL2Q9UJ55 1249 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 TMCC3Q9ULS5 477 aa23.58■■□□□ 1.37
CBX4-202ENST00000448310 FABP3P05413 133 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 CA6P23280 308 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 CD200P41217 278 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 TPTEP56180 551 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 WDR25Q64LD2 544 aaPredicted RBP23.57■■□□□ 1.36
CBX4-202ENST00000448310 BRD3OSQ6XYD6 125 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 DCDC5Q6ZRR9 648 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 FITM2Q8N6M3 262 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 CELF2-AS1Q8N7Q2 184 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 CYB561A3Q8NBI2 242 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 Q8TCH9 128 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 GNPDA2Q8TDQ7 276 aa23.57■■□□□ 1.36
CBX4-202ENST00000448310 NSRP1Q9H0G5 558 aaKnown RBP23.57■■□□□ 1.36
CBX4-202ENST00000448310 TVP23AA6NH52 213 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 CLDN34H7C241 214 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 M0R135 149 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 ARPC2O15144 300 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 HSD17B1P14061 328 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 IFNGR2P38484 337 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 TSPAN31Q12999 210 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 OR8G1Q15617 311 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 SNAI3Q3KNW1 292 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 PGBD2Q6P3X8 592 aa23.56■■□□□ 1.36
CBX4-202ENST00000448310 ZNF841Q6ZN19 808 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms