RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 MAP3K3Q99759 626 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 KLF16Q9BXK1 252 aaPredicted RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 CUTCQ9NTM9 273 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 SPAG17Q6Q759 2223 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 PDCD11Q14690 1871 aaKnown RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 WDR90Q96KV7 1748 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 C2orf72A6NCS6 295 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 MPPED1O15442 326 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 LCATP04180 440 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 FBP1P09467 338 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 CD200P41217 278 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 ST3GAL2Q16842 350 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 OPALINQ96PE5 141 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 NKX3-1Q99801 234 aaPredicted RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 MRPS28Q9Y2Q9 187 aaKnown RBP8.41□□□□□ -1.06
SMC6-207ENST00000448223 OR1A2Q9Y585 309 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 ZNF236Q9UL36 1845 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 MYLKQ15746 1914 aa8.41□□□□□ -1.06
SMC6-207ENST00000448223 CXorf65A6NEN9 183 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 F5H5K5 113 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 BMP5P22003 454 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 ACTR1BP42025 376 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 ACTR1AP61163 376 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 IKZF1Q13422 519 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 PDE7AQ13946 482 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 HLA-BQ31612 363 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 LINC00303Q3SY05 128 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 UBE3DQ7Z6J8 389 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 KREMEN2Q8NCW0 462 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 OR51A2Q8NGJ7 313 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 SMIM4Q8WVI0 70 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 FBXO34Q9NWN3 711 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 KCNK6Q9Y257 313 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 CHST2Q9Y4C5 530 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 PQLC2LA1A4F0 135 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 OR5AL1P0C617 328 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 GABRA1P14867 456 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 HMGA1P17096 107 aaKnown RBP8.4□□□□□ -1.06
SMC6-207ENST00000448223 ZP2Q05996 745 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 ECH1Q13011 328 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 ENTPD8Q5MY95 495 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 OVCH2Q7RTZ1 564 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 SLC22A24Q8N4F4 322 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 SPICQ8N5J4 248 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 VN1R17PQ8TDU5 208 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 ATP5SQ99766 215 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 Q9N2K0 584 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 GSN-AS1Q9NRJ2 163 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 OR14J1Q9UGF5 321 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 RP1P56715 2156 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 DBX1A6NMT0 343 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 H3BNC9 293 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 K7EQM0 130 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 CBR3O75828 277 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 SNCGO76070 127 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 GLCEO94923 617 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 OR8U8P0C7N1 319 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 TGFBR3Q03167 851 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 TMEM35AQ53FP2 167 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 OR4C11Q6IEV9 310 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 DGAT2L6Q6ZPD8 337 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 CMTM4Q8IZR5 234 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 TMEM104Q8NE00 496 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 FGGYQ96C11 551 aa8.4□□□□□ -1.06
SMC6-207ENST00000448223 ZNF275Q9NSD4 429 aaPredicted RBP8.4□□□□□ -1.06
SMC6-207ENST00000448223 NYNRINQ9P2P1 1898 aaKnown RBP8.4□□□□□ -1.07
SMC6-207ENST00000448223 ZNF860A6NHJ4 632 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 LINC00587B1AMM8 73 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 GCGP01275 180 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 CHRM2P08172 466 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 GLULP15104 373 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 DCTDP32321 178 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 PTGER4P35408 488 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 MMP15P51511 669 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 ERVFC1-1P60608 527 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 PNRC1Q12796 327 aaPredicted RBP8.4□□□□□ -1.07
SMC6-207ENST00000448223 ZNF385BQ569K4 471 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 LAIR2Q6ISS4 152 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 PTOV1Q86YD1 416 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 RBMXL3Q8N7X1 1067 aaKnown RBP8.4□□□□□ -1.07
SMC6-207ENST00000448223 OR5A2Q8NGI9 324 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 LPAR5Q9H1C0 372 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 AUNIPQ9H7T9 357 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 IL19Q9UHD0 177 aa8.4□□□□□ -1.07
SMC6-207ENST00000448223 RP1L1Q8IWN7 2480 aaPredicted RBP8.4□□□□□ -1.07
SMC6-207ENST00000448223 TMEM210A6NLX4 147 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 FTCDNL1E5RQL4 147 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 CLEC3AO75596 197 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 CD160O95971 181 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 CD3DP04234 171 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 CT45A6P0DMU7 189 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 CT45A5P0DMU8 189 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 CT45A7P0DMV0 189 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 TYRP1P17643 537 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 PPP2CAP67775 309 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 AESQ08117 197 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 SLC36A2Q495M3 483 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 CT45A1Q5HYN5 189 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 DMBX1Q8NFW5 382 aa8.39□□□□□ -1.07
SMC6-207ENST00000448223 CT45A3Q8NHU0 189 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms