RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 NRBF2Q96F24 287 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 FCRL1Q96LA6 429 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 FOPNLQ96NB1 174 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 RDH12Q96NR8 316 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 OR4K3Q96R72 315 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 CCDC90BQ9GZT6 254 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 NAA50Q9GZZ1 169 aaKnown RBP3.33□□□□□ -1.88
VPS29-202ENST00000447578 LRRN3Q9H3W5 708 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 NCOR1P1Q9H4R4 102 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 FANCEQ9HB96 536 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 MCCC2Q9HCC0 563 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 EXD2Q9NVH0 621 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 FAM120CQ9NX05 1096 aaKnown RBP3.33□□□□□ -1.88
VPS29-202ENST00000447578 VNN3Q9NY84 501 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 SPATA7Q9P0W8 599 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 ONECUT1Q9UBC0 465 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 VPS29Q9UBQ0 182 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 C3orf18Q9UK00 162 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 ZNF221Q9UK13 617 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 ABCG2Q9UNQ0 655 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 SAMD4AQ9UPU9 718 aaKnown RBP3.33□□□□□ -1.88
VPS29-202ENST00000447578 MEMO1Q9Y316 297 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 SAMHD1Q9Y3Z3 626 aaKnown RBP3.33□□□□□ -1.88
VPS29-202ENST00000447578 ORC6Q9Y5N6 252 aa3.33□□□□□ -1.88
VPS29-202ENST00000447578 MIA3Q5JRA6 1907 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 GNG14A0A1W2PPG7 69 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 LRP5LA4QPB2 252 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 MGAT4DA6NG13 374 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 SNTNA6NMZ2 147 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 GABRR3A8MPY1 467 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 H0YIV9 168 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 H3BMQ9 156 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 SAP18O00422 153 aaKnown RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 SLC9A3R1O14745 358 aaPredicted RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 SCAMP2O15127 329 aaKnown RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 ZNF264O43296 627 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 SRPX2O60687 465 aaPredicted RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 UGT2B11O75310 529 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 POP7O75817 140 aaKnown RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 DIRAS1O95057 198 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 CA1P00915 261 aaPredicted RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 SEMG1P04279 462 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 WNT2P09544 360 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 CISD3P0C7P0 127 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 C1GALT1C1LP0DN25 315 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 HLA-EP13747 358 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 POU2F1P14859 743 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 GPX2P18283 190 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 IL1RNP18510 177 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 ZNF10P21506 573 aaPredicted RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 IDSP22304 550 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 IGFBP5P24593 272 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 IMPA1P29218 277 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 AQP1P29972 269 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 FMO3P31513 532 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 KDELR2P33947 212 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 GPR1P46091 355 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 P2RY1P47900 373 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 PRLHRP49683 370 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 DAPP51397 102 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 SUCLG1P53597 346 aaKnown RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 GABARAPL2P60520 117 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 TBPL1P62380 186 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 CD47Q08722 323 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 COX10Q12887 443 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 IL18R1Q13478 541 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 C16orf72Q14CZ0 275 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 PCK2Q16822 640 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 RFX4Q33E94 735 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 PDZK1Q5T2W1 519 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 CPTPQ5TA50 214 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 ANXA8L1Q5VT79 327 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 PRAMEF20Q5VT98 475 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 LAIR2Q6ISS4 152 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 DHRS4L2Q6PKH6 230 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 VITQ6UXI7 678 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 EIF3MQ7L2H7 374 aaKnown RBP3.32□□□□□ -1.88
VPS29-202ENST00000447578 VTCN1Q7Z7D3 282 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 LRRTM1Q86UE6 522 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 CYP4Z1Q86W10 505 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 RNF130Q86XS8 419 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 TRAPPC5Q8IUR0 188 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 ARL14Q8N4G2 192 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 ZNF491Q8N8L2 437 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 VN1R2Q8NFZ6 395 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 OR8J2Q8NGG1 315 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 OR13F1Q8NGS4 319 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 OR9A1PQ8NGU1 263 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 MIPOL1Q8TD10 442 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 IL1F10Q8WWZ1 152 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 OR8D1Q8WZ84 308 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 NTNG2Q96CW9 530 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 OTUB2Q96DC9 234 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 NUS1Q96E22 293 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 PYGO2Q9BRQ0 406 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 GABARAPL1Q9H0R8 117 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 OR51B5Q9H339 312 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 REEP1Q9H902 201 aa3.32□□□□□ -1.88
VPS29-202ENST00000447578 TPT1P8Q9HAU6 139 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms