RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PMELP40967 661 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 SLC36A3Q495N2 470 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 KLBQ86Z14 1044 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 MAP6Q96JE9 813 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 DUX5Q96PT3 197 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 TMEM246Q9BRR3 403 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 BTBD10Q9BSF8 475 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 SSBP3Q9BWW4 388 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-205ENST00000447041 DDX28Q9NUL7 540 aaKnown RBP15.24■□□□□ 0.03
COL9A1-205ENST00000447041 TMEM100Q9NV29 134 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 TAGLN3Q9UI15 199 aa15.24■□□□□ 0.03
COL9A1-205ENST00000447041 LCATP04180 440 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 PAX2Q02962 417 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 ECH1Q13011 328 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 MAB21L1Q13394 359 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 ZNF181Q2M3W8 571 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 ZNF404Q494X3 552 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 AWAT1Q58HT5 328 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 LYPD4Q6UWN0 246 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 DEFB107AQ8IZN7 70 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 CYB561A3Q8NBI2 242 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 OR10S1Q8NGN2 331 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 ZNRF4Q8WWF5 429 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 SLCO4A1Q96BD0 722 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 C1orf147Q96MC9 270 aaPredicted RBP15.23■□□□□ 0.03
COL9A1-205ENST00000447041 ZNF48Q96MX3 618 aaPredicted RBP15.23■□□□□ 0.03
COL9A1-205ENST00000447041 LYVE1Q9Y5Y7 322 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 CDH10Q9Y6N8 788 aa15.23■□□□□ 0.03
COL9A1-205ENST00000447041 IGHV3OR16-10A0A075B7F0 116 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 DNAJC9-AS1A6NH13 148 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 TVP23AA6NH52 213 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 LRRC30A6NM36 301 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 M0R135 149 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 BHLHE40O14503 412 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 IDH3BO43837 385 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 IGHV4-38-2P0DP08 117 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 ATP6V1B2P21281 511 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 CD80P33681 288 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 GYS2P54840 703 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 GNB2P62879 340 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 HOXA4Q00056 320 aaPredicted RBP15.22■□□□□ 0.03
COL9A1-205ENST00000447041 PAX8Q06710 450 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 PRAMEF6Q5VXH4 476 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 CYP2R1Q6VVX0 501 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 RBMS3Q6XE24 437 aaKnown RBP15.22■□□□□ 0.03
COL9A1-205ENST00000447041 PGAP1Q75T13 922 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 DOK3Q7L591 496 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 C19orf18Q8NEA5 215 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 OR8D4Q8NGM9 314 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 ZNF799Q96GE5 643 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 MIOXQ9UGB7 285 aa15.22■□□□□ 0.03
COL9A1-205ENST00000447041 IGHV2-70DA0A0C4DH43 119 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 ATP8B1O43520 1251 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 ZNF823P16415 610 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 CD200P41217 278 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 GATA4P43694 442 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 RAD23AP54725 363 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 TPTEP56180 551 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 MXRA7P84157 204 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 MALLQ13021 153 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 SNAI3Q3KNW1 292 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 C16orf89Q6UX73 402 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 MRPL21Q7Z2W9 205 aaKnown RBP15.21■□□□□ 0.03
COL9A1-205ENST00000447041 C1orf87Q8N0U7 546 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 PARP8Q8N3A8 854 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 PROKR2Q8NFJ6 384 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 OR52L1Q8NGH7 329 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 OR51L1Q8NGJ5 315 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 DACT3Q96B18 629 aaPredicted RBP15.21■□□□□ 0.03
COL9A1-205ENST00000447041 ZMYND19Q96E35 227 aaPredicted RBP15.21■□□□□ 0.03
COL9A1-205ENST00000447041 NEIL1Q96FI4 390 aaPredicted RBP15.21■□□□□ 0.03
COL9A1-205ENST00000447041 DDOQ99489 341 aa15.21■□□□□ 0.03
COL9A1-205ENST00000447041 SOX21Q9Y651 276 aaPredicted RBP15.21■□□□□ 0.03
COL9A1-205ENST00000447041 C5orf63A6NC05 138 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 TNFRSF11BO00300 401 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 FAM20BO75063 409 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 PRTN3P24158 256 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 GNGT1P63211 74 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 PPP1R8Q12972 351 aaKnown RBP15.2■□□□□ 0.02
COL9A1-205ENST00000447041 MPPED2Q15777 294 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 RPL13AP3Q6NVV1 102 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 LYPD2Q6UXB3 125 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 BTNL3Q6UXE8 466 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 SLC37A3Q8NCC5 494 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 OR8B3Q8NGG8 313 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 OR4C15Q8NGM1 316 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 OR9Q1Q8NGQ5 310 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 OR2AE1Q8NHA4 323 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 Q8TCH9 128 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 SPRYD4Q8WW59 207 aaPredicted RBP15.2■□□□□ 0.02
COL9A1-205ENST00000447041 OR8B2Q96RD0 313 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 UFSP2Q9NUQ7 469 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 KCNG2Q9UJ96 466 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 ARL2BPQ9Y2Y0 163 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 COMMD3-BMI1R4GMX3 469 aa15.2■□□□□ 0.02
COL9A1-205ENST00000447041 TRAV40A0A0B4J280 105 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 KRT36O76013 467 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 FSTL3O95633 263 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 GASTP01350 101 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 HKR1P10072 659 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms