RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 CLDN34H7C241 214 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 GADD45GO95257 159 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 LCATP04180 440 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 IRF2P14316 349 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 SLC6A6P31641 620 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 PITPNBP48739 271 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 IL13RA1P78552 427 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 HOXA4Q00056 320 aaPredicted RBP12.88□□□□□ -0.35
SEC13-213ENST00000445064 KRTAP27-1Q3LI81 207 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 C9orf139Q6ZV77 190 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 NLRC3Q7RTR2 1065 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 OR2AJ1Q8NGZ0 328 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 FANK1Q8TC84 345 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 NUDT16L1Q9BRJ7 211 aaKnown RBP12.88□□□□□ -0.35
SEC13-213ENST00000445064 IFT27Q9BW83 186 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 FN3KQ9H479 309 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 UFSP2Q9NUQ7 469 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 ZNF446Q9NWS9 450 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 ADA2Q9NZK5 511 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 CLN8Q9UBY8 286 aa12.88□□□□□ -0.35
SEC13-213ENST00000445064 OR6C68A6NDL8 312 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 ARPC3O15145 178 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 GMNNO75496 209 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 FSTL3O95633 263 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 OMGP23515 440 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 NOS3P29474 1203 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 GATA4P43694 442 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 TRAP1Q12931 704 aaKnown RBP12.87□□□□□ -0.35
SEC13-213ENST00000445064 MALLQ13021 153 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 MPPED2Q15777 294 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 SLC36A3Q495N2 470 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 SLC35F1Q5T1Q4 408 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 WDR25Q64LD2 544 aaPredicted RBP12.87□□□□□ -0.35
SEC13-213ENST00000445064 C16orf87Q6PH81 154 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 BRD3OSQ6XYD6 125 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 ZNF841Q6ZN19 808 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 ZBTB46Q86UZ6 589 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 FITM2Q8N6M3 262 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 OR10S1Q8NGN2 331 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 PYURFQ96I23 114 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 ATF6BQ99941 703 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 PNRC2Q9NPJ4 139 aaKnown RBP12.87□□□□□ -0.35
SEC13-213ENST00000445064 TNFRSF19Q9NS68 423 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 CYB5R1Q9UHQ9 305 aa12.87□□□□□ -0.35
SEC13-213ENST00000445064 HOXA3O43365 443 aaPredicted RBP12.86□□□□□ -0.35
SEC13-213ENST00000445064 OR10H3O60404 316 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 FAM20BO75063 409 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 MDKP21741 143 aaPredicted RBP12.86□□□□□ -0.35
SEC13-213ENST00000445064 CA6P23280 308 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 MSX2P35548 267 aaPredicted RBP12.86□□□□□ -0.35
SEC13-213ENST00000445064 GGT2P36268 569 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 SMIM11AP58511 58 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 FGF12P61328 243 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 SPIBQ01892 262 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 ECH1Q13011 328 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 CLEC12AQ5QGZ9 265 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 SFRP4Q6FHJ7 346 aaPredicted RBP12.86□□□□□ -0.35
SEC13-213ENST00000445064 DCDC5Q6ZRR9 648 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 PGAP1Q75T13 922 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 CELF2-AS1Q8N7Q2 184 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 SDR9C7Q8NEX9 313 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 OR11L1Q8NGX0 322 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 SPRYD4Q8WW59 207 aaPredicted RBP12.86□□□□□ -0.35
SEC13-213ENST00000445064 ZDHHC16Q969W1 377 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 TMIGD2Q96BF3 282 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 CMTM5Q96DZ9 223 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 MAP6Q96JE9 813 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 ELAC2Q9BQ52 826 aaKnown RBP12.86□□□□□ -0.35
SEC13-213ENST00000445064 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
SEC13-213ENST00000445064 GORASP2Q9H8Y8 452 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 SPAG4Q9NPE6 437 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 MRPL22Q9NWU5 206 aaKnown RBP12.86□□□□□ -0.35
SEC13-213ENST00000445064 TMCC3Q9ULS5 477 aa12.86□□□□□ -0.35
SEC13-213ENST00000445064 SEMG1P04279 462 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 PSMB10P40306 273 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 CD200P41217 278 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 RPS27P42677 84 aaKnown RBP12.85□□□□□ -0.35
SEC13-213ENST00000445064 RAD23AP54725 363 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 TPTEP56180 551 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 OR8G1Q15617 311 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 MRPL21Q7Z2W9 205 aaKnown RBP12.85□□□□□ -0.35
SEC13-213ENST00000445064 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
SEC13-213ENST00000445064 Q8TCH9 128 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 ERGIC1Q969X5 290 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 PCGF1Q9BSM1 259 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 MYLK2Q9H1R3 596 aa12.85□□□□□ -0.35
SEC13-213ENST00000445064 C5orf63A6NC05 138 aa12.84□□□□□ -0.35
SEC13-213ENST00000445064 C22orf46C9J442 243 aa12.84□□□□□ -0.35
SEC13-213ENST00000445064 PHYHO14832 338 aa12.84□□□□□ -0.35
SEC13-213ENST00000445064 IDH3BO43837 385 aa12.84□□□□□ -0.35
SEC13-213ENST00000445064 ZNF823P16415 610 aa12.84□□□□□ -0.35
SEC13-213ENST00000445064 ANOS1P23352 680 aa12.84□□□□□ -0.35
SEC13-213ENST00000445064 PYCR1P32322 319 aa12.84□□□□□ -0.35
SEC13-213ENST00000445064 GSSP48637 474 aa12.84□□□□□ -0.35
SEC13-213ENST00000445064 ZNF92Q03936 586 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms