RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ITPR2Q14571 2701 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 PLCE1Q9P212 2302 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
SSBP3-208ENST00000444533 RAI1Q7Z5J4 1906 aaPredicted RBP12.1□□□□□ -0.47
SSBP3-208ENST00000444533 IGLV3-9A0A075B6K5 115 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 NBPF19A0A087WUL8 3843 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 DAPL1A0PJW8 107 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 E9PQ18 207 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
SSBP3-208ENST00000444533 IGHV3-13P01766 116 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 PAX1P15863 534 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 TNFSF4P23510 183 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 OTX1P32242 354 aaPredicted RBP12.1□□□□□ -0.47
SSBP3-208ENST00000444533 HCCSP53701 268 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 MED21Q13503 144 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 TIGD6Q17RP2 521 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 MST1LQ2TV78 715 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 PCGF3Q3KNV8 242 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 KRTAP27-1Q3LI81 207 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 LRRN1Q6UXK5 716 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 PGAP1Q75T13 922 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 NEU4Q8WWR8 484 aaPredicted RBP12.1□□□□□ -0.47
SSBP3-208ENST00000444533 CMBLQ96DG6 245 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 PGAM5Q96HS1 289 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 TBX5Q99593 518 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 BRD7Q9NPI1 651 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 NOP16Q9Y3C1 178 aaKnown RBP12.1□□□□□ -0.47
SSBP3-208ENST00000444533 LRP12Q9Y561 859 aa12.1□□□□□ -0.47
SSBP3-208ENST00000444533 DLGAP1O14490 977 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 CLPTM1O96005 669 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 TACSTD2P09758 323 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 PSKH1P11801 424 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 DCTDP32321 178 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 ALDH3B1P43353 468 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF81P51508 661 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 EFNA4P52798 201 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF121P58317 390 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-208ENST00000444533 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
SSBP3-208ENST00000444533 ROM1Q03395 351 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 MAD2L1BPQ15013 274 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-208ENST00000444533 SNCBQ16143 134 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 ALKBH6Q3KRA9 238 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 PRSS57Q6UWY2 283 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 PLEKHG7Q6ZR37 379 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 COLCA1Q6ZS62 124 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 FAM57BQ71RH2 274 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 LRP11Q86VZ4 500 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 SPRYD4Q8WW59 207 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-208ENST00000444533 IGFBPL1Q8WX77 278 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 HAVCR1Q96D42 359 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 OR8B4Q96RC9 309 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 DIRC2Q96SL1 478 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 RGCCQ9H4X1 137 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 MYOZ1Q9NP98 299 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-208ENST00000444533 DECR2Q9NUI1 292 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 ZNF391Q9UJN7 358 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 ZDHHC8Q9ULC8 765 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 GTF2A1LQ9UNN4 478 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 HRNRQ86YZ3 2850 aaPredicted RBP12.09□□□□□ -0.47
SSBP3-208ENST00000444533 TACC2O95359 2948 aa12.09□□□□□ -0.47
SSBP3-208ENST00000444533 TMEM269A0A1B0GVZ9 245 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 A0A1W2PQL4 384 aaPredicted RBP12.08□□□□□ -0.48
SSBP3-208ENST00000444533 TMEM129A0AVI4 362 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 GGT3PA6NGU5 568 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 ACOD1A6NK06 481 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 PSMD9O00233 223 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 APOL3O95236 402 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 CLIC3O95833 236 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 F12P00748 615 aaPredicted RBP12.08□□□□□ -0.48
SSBP3-208ENST00000444533 CSF3P09919 207 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 SLC2A1P11166 492 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 DBTP11182 482 aaKnown RBP12.08□□□□□ -0.48
SSBP3-208ENST00000444533 MPV17P39210 176 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 VHLP40337 213 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 DSCR9P59020 149 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 PSMA6P60900 246 aaKnown RBP12.08□□□□□ -0.48
SSBP3-208ENST00000444533 ACTA2P62736 377 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 ACTG2P63267 376 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 ZNF91Q05481 1191 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 RAB40BQ12829 278 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.48
SSBP3-208ENST00000444533 Q5PR19 223 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 CLEC2AQ6UVW9 174 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 USP51Q70EK9 711 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 KCTD20Q7Z5Y7 419 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 THAP5Q7Z6K1 395 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 COMMD2Q86X83 199 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 FTMTQ8N4E7 242 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 ACBD7Q8N6N7 88 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 YIPF7Q8N8F6 280 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 AMELYQ99218 206 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 TTTY10Q9BZA0 68 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 MOB1AQ9H8S9 216 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 INPP5EQ9NRR6 644 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 CHCHD3Q9NX63 227 aaKnown RBP12.08□□□□□ -0.48
SSBP3-208ENST00000444533 PURGQ9UJV8 347 aaKnown RBP12.08□□□□□ -0.48
SSBP3-208ENST00000444533 KLHDC2Q9Y2U9 406 aa12.08□□□□□ -0.48
SSBP3-208ENST00000444533 POLQO75417 2590 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms