RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 HLA-CQ95604 372 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 MRGPRFQ96AM1 343 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 ARL6Q9H0F7 186 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 NARFLQ9H6Q4 476 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 CHCHD2Q9Y6H1 151 aaPredicted RBP14.19□□□□□ -0.14
SHQ1-202ENST00000444040 RP2O75695 350 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 PPP3CBP16298 524 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 KLK2P20151 261 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 CALCRP30988 508 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 DHRS2Q13268 280 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 MEF2DQ14814 521 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 SCGB2B2Q4G0G5 96 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 RNF144BQ7Z419 303 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 GVQW1Q8N7I0 195 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 OXGR1Q96P68 337 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 SOX7Q9BT81 388 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 MOB1AQ9H8S9 216 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 PNRC2Q9NPJ4 139 aaKnown RBP14.19□□□□□ -0.14
SHQ1-202ENST00000444040 FBLN5Q9UBX5 448 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 FBXO4Q9UKT5 387 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 TRAV14DV4A0A0A6YYC5 116 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 RFPL4AA6NLU0 287 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 TMEM14DPA8MWL7 114 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 RFPL4AL1F8VTS6 287 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 MPZP25189 248 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 ARPC4P59998 168 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 GMFBP60983 142 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 SORDQ00796 357 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 CARD17Q5XLA6 110 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 C17orf107Q6ZR85 190 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 TRAPPC6BQ86SZ2 158 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 CD163Q86VB7 1156 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 OR2AJ1Q8NGZ0 328 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 SUN5Q8TC36 379 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF319Q9P2F9 582 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 VSIG4Q9Y279 399 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 GDF9O60383 454 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 ADH6P28332 368 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 SFTPDP35247 375 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 PRKXP51817 358 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 GABREP78334 506 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 NKPD1Q17RQ9 610 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 SLC22A6Q4U2R8 563 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 CLVS2Q5SYC1 327 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 NAXDQ8IW45 347 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 ASH2LQ9UBL3 628 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 POLR1DQ9Y2S0 133 aa14.18□□□□□ -0.14
SHQ1-202ENST00000444040 TMEM265A0A087WTH1 108 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 TEX51A0A1B0GUA7 166 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 DISC1C4P0D8 188 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 RER1O15258 196 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 CSN2P05814 226 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 NMBP08949 121 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 RPA2P15927 270 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ABOP16442 354 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF17P17021 662 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF93P35789 620 aaPredicted RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 PCOLCEQ15113 449 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 KCNMB1Q16558 191 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 TMEM176BQ3YBM2 270 aaPredicted RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ANGPTL5Q86XS5 388 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 CHST4Q8NCG5 386 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 OR8B12Q8NGG6 310 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 SLC25A43Q8WUT9 341 aaPredicted RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 NUDCD2Q8WVJ2 157 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 NUDT16L1Q9BRJ7 211 aaKnown RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 REG4Q9BYZ8 158 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 HDGFL3Q9Y3E1 203 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 SIT1Q9Y3P8 196 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 PHF3Q92576 2039 aaKnown RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 RALGAPA1Q6GYQ0 2036 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 LOC102725191A0A1B0GVB3 256 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ZSCAN5BA6NJL1 495 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 AQP7P3A6NL99 342 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 CYC1P08574 325 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 QDPRP09417 244 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 SLC2A1P11166 492 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF43P17038 809 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF121P58317 390 aaPredicted RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 CXADRP78310 365 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 SRSF4Q08170 494 aaKnown RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 RNASE10Q5GAN6 216 aaKnown RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 RGS7BPQ6MZT1 257 aaPredicted RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ALKAL2Q6UX46 152 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 HDDC2Q7Z4H3 204 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 OR5AS1Q8N127 324 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 STEAP2Q8NFT2 490 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 OR4K17Q8NGC6 315 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 LRRC20Q8TCA0 184 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 SCARB1Q8WTV0 552 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 RBPMSQ93062 196 aaKnown RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 PRRT1Q99946 306 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 DHRS9Q9BPW9 319 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 PRO3102Q9H379 93 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 RDH8Q9NYR8 311 aa14.17□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF230Q9UIE0 474 aaPredicted RBP14.17□□□□□ -0.14
SHQ1-202ENST00000444040 CD8AP01732 235 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 GNB3P16520 340 aa14.16□□□□□ -0.14
SHQ1-202ENST00000444040 EIF1P41567 113 aaKnown RBP14.16□□□□□ -0.14
SHQ1-202ENST00000444040 GSK3AP49840 483 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms