RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 SPTSSAQ969W0 71 aa13.67□□□□□ -0.22
CTDSP1-204ENST00000443891 SLC25A28Q96A46 364 aa13.67□□□□□ -0.22
CTDSP1-204ENST00000443891 UPRTQ96BW1 309 aa13.67□□□□□ -0.22
CTDSP1-204ENST00000443891 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
CTDSP1-204ENST00000443891 IL1RAPQ9NPH3 570 aa13.67□□□□□ -0.22
CTDSP1-204ENST00000443891 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-204ENST00000443891 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
CTDSP1-204ENST00000443891 TENM1Q9UKZ4 2725 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 IGHV2-70DA0A0C4DH43 119 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 KIR2DS1A0A191URI9 304 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 POM121CA8CG34 1229 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 PHYHO14832 338 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 DIRAS1O95057 198 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 FABP3P05413 133 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 RNASE1P07998 156 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 CD80P33681 288 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 NPY4RP50391 375 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 HMGA2P52926 109 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 TRAP1Q12931 704 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 BAMBIQ13145 260 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 GK2Q14410 553 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 MEP1BQ16820 701 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 C11orf91Q3C1V1 193 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 CORO6Q6QEF8 472 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 PGAP1Q75T13 922 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 MOGAT3Q86VF5 341 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 PGAM4Q8N0Y7 254 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 OR4C15Q8NGM1 316 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 ZNF420Q8TAQ5 688 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 DACT3Q96B18 629 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 TMEM246Q9BRR3 403 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 OPA3Q9H6K4 179 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 TRIM36Q9NQ86 728 aa13.66□□□□□ -0.22
CTDSP1-204ENST00000443891 DNAJC9-AS1A6NH13 148 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 F5H5K5 113 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 F5H5P2 479 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 H0YL77 283 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 SNX3O60493 162 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 GMDSO60547 372 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 PTBP3O95758 552 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 CYB5R3P00387 301 aaPredicted RBP13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 PLATP00750 562 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 HLA-DQA2P01906 255 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 LCATP04180 440 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 ZNF823P16415 610 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 GGT2P36268 569 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 PITPNBP48739 271 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 RAD23AP54725 363 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 GNGT1P63211 74 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 IL13RA1P78552 427 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 OTPQ5XKR4 325 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 ZNF620Q6ZNG0 422 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 CFAP77Q6ZQR2 320 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 PARP8Q8N3A8 854 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 SPERTQ8NA61 448 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 OR52L1Q8NGH7 329 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 SPRYD4Q8WW59 207 aaPredicted RBP13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 ZNF696Q9H7X3 374 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 PNRC2Q9NPJ4 139 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 CLN8Q9UBY8 286 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 CD300AQ9UGN4 299 aa13.65□□□□□ -0.22
CTDSP1-204ENST00000443891 OR6C68A6NDL8 312 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 M0R135 149 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 NDUFA2O43678 99 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 GPANK1O95872 356 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 LIPFP07098 398 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 RRM2P31350 389 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 MZT1Q08AG7 82 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 MAB21L1Q13394 359 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 PRR31Q5SQ13 230 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 DRAM2Q6UX65 266 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 MRPL21Q7Z2W9 205 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 RNF148Q8N7C7 305 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 BHLHE23Q8NDY6 225 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 OR2T4Q8NH00 348 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 ZNF799Q96GE5 643 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 TRIM15Q9C019 465 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 PRDM13Q9H4Q3 707 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 CDH10Q9Y6N8 788 aa13.64□□□□□ -0.23
CTDSP1-204ENST00000443891 ARHGAP32A7KAX9 2087 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 PSMB10P40306 273 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 PMELP40967 661 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 CD276Q5ZPR3 534 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 WDR25Q64LD2 544 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 LINC00346Q8IVM7 164 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 SDR9C7Q8NEX9 313 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 SLCO4A1Q96BD0 722 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 NUDT16L1Q9BRJ7 211 aaKnown RBP13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 FN3KRPQ9HA64 309 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 IL20Q9NYY1 176 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 MRPL15Q9P015 296 aaKnown RBP13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 RNF7Q9UBF6 113 aa13.63□□□□□ -0.23
CTDSP1-204ENST00000443891 CD300LBA8K4G0 201 aa13.62□□□□□ -0.23
CTDSP1-204ENST00000443891 BHLHE40O14503 412 aa13.62□□□□□ -0.23
CTDSP1-204ENST00000443891 ARPC2O15144 300 aa13.62□□□□□ -0.23
CTDSP1-204ENST00000443891 ENSAO43768 121 aaKnown RBP13.62□□□□□ -0.23
CTDSP1-204ENST00000443891 HLA-DPB1P04440 258 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms