RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 COLCA1Q6ZS62 124 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 NAA40Q86UY6 237 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 TMEM186Q96B77 213 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 CENPMQ9NSP4 180 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 DDX28Q9NUL7 540 aaKnown RBP17.82■□□□□ 0.44
CDKN3-204ENST00000442975 TMEM106BQ9NUM4 274 aa17.82■□□□□ 0.44
CDKN3-204ENST00000442975 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.81■□□□□ 0.444e-9■■■■■ 29.4
CDKN3-204ENST00000442975 IGHV3-64DA0A0J9YX35 117 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 ZNF593O00488 134 aaPredicted RBP17.81■□□□□ 0.44
CDKN3-204ENST00000442975 TIPRLO75663 272 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 PAICSP22234 425 aaKnown RBP17.81■□□□□ 0.44
CDKN3-204ENST00000442975 PRKACGP22612 351 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 GK2Q14410 553 aaPredicted RBP17.81■□□□□ 0.44
CDKN3-204ENST00000442975 GINS1Q14691 196 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 MRPL21Q7Z2W9 205 aaKnown RBP17.81■□□□□ 0.44
CDKN3-204ENST00000442975 ERI1Q8IV48 349 aaKnown RBP17.81■□□□□ 0.44
CDKN3-204ENST00000442975 OR8G5Q8NG78 346 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 SLCO4A1Q96BD0 722 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 SLAMF6Q96DU3 332 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 IL19Q9UHD0 177 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 PPP1R3CQ9UQK1 317 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 N6AMT1Q9Y5N5 214 aa17.81■□□□□ 0.44
CDKN3-204ENST00000442975 IGHV2-5P01817 119 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 OSMP13725 252 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 SELEP16581 610 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 RASSF2P50749 326 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 PRKXP51817 358 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 BLVRAP53004 296 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 SNAI3Q3KNW1 292 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 ACSM5Q6NUN0 579 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 PGAP1Q75T13 922 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 ZNF283Q8N7M2 679 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 OR6N2Q8NGY6 317 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 OR13G1Q8NGZ3 307 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 INTS14Q96SY0 518 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 OR51V1Q9H2C8 321 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 MALRD1Q5VYJ5 2156 aa17.8■□□□□ 0.44
CDKN3-204ENST00000442975 IQCF6A8MYZ5 107 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 ZNF878C9JN71 531 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 DEAF1O75398 565 aaPredicted RBP17.79■□□□□ 0.44
CDKN3-204ENST00000442975 SLC2A1P11166 492 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 ANXA8P13928 327 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 GSTT1P30711 240 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 MMP16P51512 607 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 EIF2B1Q14232 305 aaKnown RBP17.79■□□□□ 0.44
CDKN3-204ENST00000442975 LINC01590Q5TEZ4 76 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 PLBD1Q6P4A8 553 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 SHQ1Q6PI26 577 aaKnown RBP17.79■□□□□ 0.44
CDKN3-204ENST00000442975 PAPD5Q8NDF8 572 aaKnown RBP17.79■□□□□ 0.44
CDKN3-204ENST00000442975 OR2AE1Q8NHA4 323 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 SPRYD4Q8WW59 207 aaPredicted RBP17.79■□□□□ 0.44
CDKN3-204ENST00000442975 MEGF10Q96KG7 1140 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 NPTNQ9Y639 398 aa17.79■□□□□ 0.44
CDKN3-204ENST00000442975 TRAV20A0A0B4J274 112 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 RNF212BA8MTL3 300 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 PRR23D1E9PI22 279 aaPredicted RBP17.78■□□□□ 0.44
CDKN3-204ENST00000442975 F5H5P2 479 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 H0YL77 283 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 PHF1O43189 567 aaPredicted RBP17.78■□□□□ 0.44
CDKN3-204ENST00000442975 MLNRO43193 412 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 HLA-DPB1P04440 258 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 SBK2P0C263 348 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 PRR23D2P0DMB1 279 aaPredicted RBP17.78■□□□□ 0.44
CDKN3-204ENST00000442975 ANPEPP15144 967 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 SRP9P49458 86 aaKnown RBP17.78■□□□□ 0.44
CDKN3-204ENST00000442975 C1orf146Q5VVC0 180 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 DRAM2Q6UX65 266 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 DPY19L4Q7Z388 723 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 ST7LQ8TDW4 575 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 ZMYND19Q96E35 227 aaPredicted RBP17.78■□□□□ 0.44
CDKN3-204ENST00000442975 PLEKHA8Q96JA3 519 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 SLC30A2Q9BRI3 323 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 TMEM100Q9NV29 134 aa17.78■□□□□ 0.44
CDKN3-204ENST00000442975 FBN1P35555 2871 aaKnown RBP17.77■□□□□ 0.44
CDKN3-204ENST00000442975 ATP5HO75947 161 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 IGHV2-70P01814 119 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 ANOS1P23352 680 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 HSD11B1P28845 292 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 RPS7P62081 194 aaKnown RBP17.77■□□□□ 0.44
CDKN3-204ENST00000442975 PCK2Q16822 640 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 KLHL12Q53G59 568 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 TEX30Q5JUR7 227 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 FAHD2BQ6P2I3 314 aaPredicted RBP17.77■□□□□ 0.44
CDKN3-204ENST00000442975 CXXC5Q7LFL8 322 aaKnown RBP17.77■□□□□ 0.44
CDKN3-204ENST00000442975 FAHD2AQ96GK7 314 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 TEX12Q9BXU0 123 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 GCM1Q9NP62 436 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 PAPOLBQ9NRJ5 636 aaKnown RBP17.77■□□□□ 0.44
CDKN3-204ENST00000442975 PCDHB10Q9UN67 800 aa17.77■□□□□ 0.44
CDKN3-204ENST00000442975 C5orf63A6NC05 138 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 PLPP2O43688 288 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 GLCEO94923 617 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 HMGN1P05114 100 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 OTX1P32242 354 aaPredicted RBP17.76■□□□□ 0.43
CDKN3-204ENST00000442975 CX3CR1P49238 355 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 BTG1P62324 171 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 ZNF92Q03936 586 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 GLYATL3Q5SZD4 288 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 TMEM236Q5W0B7 351 aa17.76■□□□□ 0.43
CDKN3-204ENST00000442975 MOGAT3Q86VF5 341 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms