RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 FBXL14Q8N1E6 418 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 WDSUB1Q8N9V3 476 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 C19orf18Q8NEA5 215 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 GPR119Q8TDV5 335 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 TNFRSF13CQ96RJ3 184 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 ACTR6Q9GZN1 396 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 AUNIPQ9H7T9 357 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 CRLF2Q9HC73 371 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 GRHPRQ9UBQ7 328 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 RABL2BQ9UNT1 228 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A096LPE4 126 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A1W2PPZ6 126 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 TMEM127O75204 238 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADH6P28332 368 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 GRPRP30550 384 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 CCR6P51684 374 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 TAS2R43P59537 309 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 MRPS15P82914 257 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 KLHL26Q53HC5 615 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 FAM69AQ5T7M9 428 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 NSUN5P2Q63ZY6 315 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 FAM166AQ6J272 317 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 TMEM65Q6PI78 240 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC36A1Q7Z2H8 476 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 CDH24Q86UP0 819 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 C9orf106Q8NAJ2 232 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 NSMAFQ92636 917 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 KLHDC3Q9BQ90 382 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 C7orf50Q9BRJ6 194 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 IFT27Q9BW83 186 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR51J1Q9H342 316 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 NARFLQ9H6Q4 476 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 NUDT15Q9NV35 164 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 GPR160Q9UJ42 338 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 ING1Q9UK53 422 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 DOCK10Q96BY6 2186 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 PCNX3Q9H6A9 2034 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 C17orf51A8MQB3 221 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 DOK2O60496 412 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 CRYZL1O95825 349 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 SNRPBP14678 240 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 NKPD1Q17RQ9 610 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 CLLU1Q5K131 121 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 PCSK4Q6UW60 755 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 C5orf46Q6UWT4 87 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 NLRC3Q7RTR2 1065 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 DTX3Q8N9I9 347 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR2AJ1Q8NGZ0 328 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 EMC6Q9BV81 110 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZDHHC11Q9H8X9 412 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 ING3Q9NXR8 418 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 BAIAP2Q9UQB8 552 aa6.52□□□□□ -1.37
CDC42BPA-208ENST00000442054 DOCK7Q96N67 2140 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 TNRC6BQ9UPQ9 1833 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 TRBV5-7A0A0A0MS05 114 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A1W2PQD3 144 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 ANKRD20A5PA0PJZ0 165 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR6C68A6NDL8 312 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 LRRC3CA6NJW4 275 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 ARPC3O15145 178 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 RENP00797 406 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 BTF3P20290 206 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 RAB3BP20337 219 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 BEX5Q5H9J7 111 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR7E24Q6IFN5 339 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 DNM1P34Q6PK57 102 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 FGD2Q7Z6J4 655 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 RPRMLQ8N4K4 120 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 SPICQ8N5J4 248 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 WDYHV1Q96HA8 205 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 DERL3Q96Q80 235 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 FOXJ3Q9UPW0 622 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 TMEM5Q9Y2B1 443 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 KLHDC2Q9Y2U9 406 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 TRAV36DV7A0A075B6V5 113 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 A0A0G2JNJ9 132 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 FADS1O60427 444 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 SMPD2O60906 423 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 GATBO75879 557 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 AQP8O94778 261 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 PPP1R3DO95685 299 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 TXNDC12O95881 172 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 CRHP06850 196 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 CD3GP09693 182 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR2T7P0C7T2 308 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 CPN1P15169 458 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 GIFP27352 417 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 GCH1P30793 250 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 APLNRP35414 380 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 CCR9P51686 369 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 ART1P52961 327 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 CTXN1P60606 82 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 EGR4Q05215 589 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 POU4F2Q12837 409 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 UBE2NLQ5JXB2 153 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 IDO2Q6ZQW0 420 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 LURAP1LQ8IV03 231 aa6.51□□□□□ -1.37
CDC42BPA-208ENST00000442054 MS4A15Q8N5U1 240 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms