RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ABHD14AQ9BUJ0 271 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 PECRQ9BY49 303 aa9.33□□□□□ -0.92
SYNE2-206ENST00000441438 MARCOQ9UEW3 520 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-206ENST00000441438 KIAA0100Q14667 2235 aaKnown RBP9.32□□□□□ -0.92
SYNE2-206ENST00000441438 C2CD4BA6NLJ0 364 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 PPP5D1E7EU14 171 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 APOC4-APOC2K7ER74 178 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 MBTPS2O43462 519 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 MRPS14O60783 128 aaKnown RBP9.32□□□□□ -0.92
SYNE2-206ENST00000441438 HSBP1O75506 76 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 IFNA1P01562 189 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 APOC2P02655 101 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 CTSLP07711 333 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 EPHA1P21709 976 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 OR10A3P58181 314 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 LAMTOR4Q0VGL1 99 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 CDK5R2Q13319 367 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 RPEL1Q2QD12 228 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 ACTL10Q5JWF8 245 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 C6orf52Q5T4I8 152 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF648Q5T619 568 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF474Q6S9Z5 364 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-206ENST00000441438 Q6ZSR3 168 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF676Q8N7Q3 588 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 KLHDC9Q8NEP7 349 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 OR13C4Q8NGS5 318 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 C16orf52Q8NHV5 167 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 RTP4Q96DX8 246 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 ST6GAL2Q96JF0 529 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 TIMP4Q99727 224 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 NXF5Q9H1B4 397 aaKnown RBP9.32□□□□□ -0.92
SYNE2-206ENST00000441438 IL23AQ9NPF7 189 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 DUS2Q9NX74 493 aaKnown RBP9.32□□□□□ -0.92
SYNE2-206ENST00000441438 MEIKINA0A087WXM9 373 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 PLPP3O14495 311 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 TNFSF15O95150 251 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 FGF19O95750 216 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 VTNP04004 478 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 C8orf88P0DMB2 117 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 FGF9P31371 208 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-206ENST00000441438 AGTR2P50052 363 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 TCL1AP56279 114 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 RIPPLY3P57055 190 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 OC90Q02509 493 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-206ENST00000441438 TMEM128Q5BJH2 165 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 ISOC1Q96CN7 298 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 SMIM19Q96E16 107 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 SORT1Q99523 831 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 CXCL16Q9H2A7 254 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 PLAC1Q9HBJ0 212 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 LRTM1Q9HBL6 345 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 MYOTQ9UBF9 498 aa9.32□□□□□ -0.92
SYNE2-206ENST00000441438 CDHR4A6H8M9 788 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 FAM74A7A6NL05 159 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 HCRTO43612 131 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 HLA-HP01893 362 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 ZNF43P17038 809 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 TBPP20226 339 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 ITPKBP27987 946 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 SLC25A11Q02978 314 aaKnown RBP9.31□□□□□ -0.92
SYNE2-206ENST00000441438 FAM174BQ3ZCQ3 159 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 FAM74A3Q4VXF1 159 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 FAM78BQ5VT40 261 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 GDF6Q6KF10 455 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-206ENST00000441438 EPGNQ6UW88 154 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 SFXN5Q8TD22 340 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 KCTD7Q96MP8 289 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 SLC2A4RGQ9NR83 387 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 CALML5Q9NZT1 146 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 RNF6Q9Y252 685 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 TPST1O60507 370 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 C1RP00736 705 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 VPREB1P12018 145 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 FOLR2P14207 255 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 IRF2P14316 349 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 CRISP1P54107 249 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 ARPP19P56211 112 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 CD300LDQ6UXZ3 194 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 VRK3Q8IV63 474 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 OR10G9Q8NGN4 311 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 PIK3IP1Q96FE7 263 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 NKX3-1Q99801 234 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-206ENST00000441438 CLMPQ9H6B4 373 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 CACYBPQ9HB71 228 aaKnown RBP9.31□□□□□ -0.92
SYNE2-206ENST00000441438 FAM49BQ9NUQ9 324 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 MED11Q9P086 117 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 VPS29Q9UBQ0 182 aa9.31□□□□□ -0.92
SYNE2-206ENST00000441438 A0A087WXM4 84 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CENPVL1A0A0U1RR11 272 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CENPVL3A0A0U1RRI6 287 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CCDC195A0A1B0GUA6 201 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CXorf49A8MYA2 514 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-206ENST00000441438 E5RGE8 158 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 DCTN6O00399 190 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 CELA2BP08218 269 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-206ENST00000441438 AK4P27144 223 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ARRB2P32121 409 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ARL2P36404 184 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 TMEM50BP56557 158 aa9.3□□□□□ -0.92
SYNE2-206ENST00000441438 ZXDAP98168 799 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms