RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TMEM185BQ9H7F4 350 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 AUNIPQ9H7T9 357 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 AKIRIN1Q9H9L7 192 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 SCPEP1Q9HB40 452 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 G6PC2Q9NQR9 355 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 NUDT15Q9NV35 164 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 FAM206AQ9NX38 181 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ANKRD10Q9NXR5 420 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 STMN3Q9NZ72 180 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 GDF2Q9UK05 429 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 ING1Q9UK53 422 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 CLEC4AQ9UMR7 237 aa8.1□□□□□ -1.11
HDAC6-209ENST00000440653 BOKQ9UMX3 212 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-209ENST00000440653 PCSK5Q92824 1860 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 HIVEP3Q5T1R4 2406 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 A0A0B4J203 849 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 A0A1B0GVI7 797 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 A0A1W2PNR3 127 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 ANKRD20A5PA0PJZ0 165 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 OR2M5A3KFT3 312 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 SHISA8B8ZZ34 492 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 AGRPO00253 132 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 LANCL1O43813 399 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 PNPP00491 289 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 C1QBP02746 253 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 TCRBP04435 133 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 CELA2AP08217 269 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 CD3GP09693 182 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 GABRA1P14867 456 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 MSR1P21757 451 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 CDK2P24941 298 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 HTR2CP28335 458 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 OTX2P32243 289 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 PTH2RP49190 550 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 POU3F4P49335 361 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 ZNF84P51523 738 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 SUCLG1P53597 346 aaKnown RBP8.09□□□□□ -1.11
HDAC6-209ENST00000440653 SNTB2Q13425 540 aaKnown RBP8.09□□□□□ -1.11
HDAC6-209ENST00000440653 MADCAM1Q13477 382 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 CARTPTQ16568 116 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 RAB12Q6IQ22 244 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 ESPNLQ6ZVH7 1005 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 SIAH3Q8IW03 269 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 CDH26Q8IXH8 852 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 BEST3Q8N1M1 668 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 MARVELD3Q96A59 401 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 FAM3DQ96BQ1 224 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 SORCS2Q96PQ0 1159 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 CACNG6Q9BXT2 260 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 C20orf85Q9H1P6 137 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 SLCO5A1Q9H2Y9 848 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 NELFAQ9H3P2 528 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 B4GALT7Q9UBV7 327 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 MRPS7Q9Y2R9 242 aaKnown RBP8.09□□□□□ -1.11
HDAC6-209ENST00000440653 LHFPL6Q9Y693 200 aa8.09□□□□□ -1.11
HDAC6-209ENST00000440653 CCDC168Q8NDH2 2452 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 IGKV1D-43A0A0B4J1Z2 117 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 A0A1B0GUH1 482 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 SYT7O43581 403 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 PEX14O75381 377 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 CTAG2O75638 210 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 BPNT1O95861 308 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 WNT11O96014 354 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 ITGA5P08648 1049 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 LIPCP11150 499 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 ZNF20P17024 532 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 TCN2P20062 427 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 CCL1P22362 96 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 AGFG1P52594 562 aaKnown RBP8.08□□□□□ -1.12
HDAC6-209ENST00000440653 RAC3P60763 192 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 CAMK2DQ13557 499 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 ZMYND11Q15326 602 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 TAF13Q15543 124 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 KCNJ8Q15842 424 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 ACER2Q5QJU3 275 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 C1orf100Q5SVJ3 147 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 PDSS1Q5T2R2 415 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 ABLIM2Q6H8Q1 611 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 NCCRP1Q6ZVX7 275 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-209ENST00000440653 PGAP1Q75T13 922 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 MDGA2Q7Z553 956 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 NOXA1Q86UR1 476 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 LINC00346Q8IVM7 164 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 KDM8Q8N371 416 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 SLC22A24Q8N4F4 322 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 OR9K2Q8NGE7 335 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 TMEM54Q969K7 222 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 FOXN4Q96NZ1 517 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 UTP23Q9BRU9 249 aaKnown RBP8.08□□□□□ -1.12
HDAC6-209ENST00000440653 REPIN1Q9BWE0 567 aaKnown RBP8.08□□□□□ -1.12
HDAC6-209ENST00000440653 PBOV1Q9GZY1 135 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 MED28Q9H204 178 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 METTL17Q9H7H0 456 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-209ENST00000440653 EMC7Q9NPA0 242 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 MCUBQ9NWR8 336 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 P4HTMQ9NXG6 502 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 TAS2R4Q9NYW5 299 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 GLTPQ9NZD2 209 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 FBLN5Q9UBX5 448 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 TUBD1Q9UJT1 453 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms