RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CISD2Q8N5K1 135 aaKnown RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CCDC54Q8NEL0 328 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 FNDC9Q8TBE3 224 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ABHD3Q8WU67 409 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TSEN15Q8WW01 171 aaKnown RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ITFG2Q969R8 447 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 SPTSSAQ969W0 71 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TRMT61AQ96FX7 289 aaKnown RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 GMPPAQ96IJ6 420 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF845Q96IR2 970 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 C4orf45Q96LM5 186 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CMTM3Q96MX0 182 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 FOXN4Q96NZ1 517 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 DERL3Q96Q80 235 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 AMELYQ99218 206 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 KCNS3Q9BQ31 491 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PDCD1LG2Q9BQ51 273 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF416Q9BWM5 594 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TTTY10Q9BZA0 68 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 HDHD2Q9H0R4 259 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZCCHC4Q9H5U6 513 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 RNF167Q9H6Y7 350 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CALHM2Q9HA72 323 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CRLF2Q9HC73 371 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 SMURF1Q9HCE7 757 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 EMC7Q9NPA0 242 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 AKIP1Q9NQ31 210 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CENPMQ9NSP4 180 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 DDX28Q9NUL7 540 aaKnown RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TMEM38BQ9NVV0 291 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 SPRR3Q9UBC9 169 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 RABL2AQ9UBK7 228 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ASH2LQ9UBL3 628 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 UPB1Q9UBR1 384 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 PLEKHB1Q9UF11 243 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 ING1Q9UK53 422 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR52A1Q9UKL2 312 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 HHLA2Q9UM44 414 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 GTF2A1LQ9UNN4 478 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 RABL2BQ9UNT1 228 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 DHDHQ9UQ10 334 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 GRIP1Q9Y3R0 1128 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 CMAHPQ9Y471 501 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 LRP12Q9Y561 859 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 TIMM10BQ9Y5J6 103 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 DOCK7Q96N67 2140 aa3.49□□□□□ -1.85
HMGB1P37-201ENST00000439613 NCOR2Q9Y618 2525 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 RTTNQ86VV8 2226 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 ATMQ13315 3056 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 NBEAQ8NFP9 2946 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 SPTA1P02549 2419 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 TRBV5-7A0A0A0MS05 114 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 A0A0U1RQV5 110 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 A0A1B0GVI7 797 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 K7ENP7 123 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 PSMD9O00233 223 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 CTDSP2O14595 271 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 LRRTM2O43300 516 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 SGCEO43556 437 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 SS18L1O75177 396 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 SRSF10O75494 262 aaKnown RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 TPPPO94811 219 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 CNOT4O95628 575 aaKnown RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 PNPP00491 289 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 APOA1P02647 267 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 CRHP06850 196 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 ERCC1P07992 297 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 CLEC2LP0C7M8 214 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 GLI4P10075 376 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 PSKH1P11801 424 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 GABRA1P14867 456 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 APEX1P27695 318 aaKnown RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 CDAP32320 146 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 ARR3P36575 388 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 RPS27P42677 84 aaKnown RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 KIR3DL2P43630 455 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 CX3CR1P49238 355 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 TPTEP56180 551 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 SCAND1P57086 179 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 ARF1P84077 181 aaKnown RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 PMP22Q01453 160 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 TGFBR3Q03167 851 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 ENDOGQ14249 297 aaKnown RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 RAB35Q15286 201 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 TBR1Q16650 682 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 EIF2S3LQ2VIR3 472 aaKnown RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 CEACAM16Q2WEN9 425 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 PLEKHN1Q494U1 663 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 SLC36A2Q495M3 483 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 WDR38Q5JTN6 314 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 ELFN2Q5R3F8 820 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 PHYHD1Q5SRE7 291 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 IDNKQ5T6J7 187 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 OR7E24Q6IFN5 339 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 TMEM53Q6P2H8 277 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 SFXN4Q6P4A7 337 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 INO80CQ6PI98 192 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 XKRXQ6PP77 449 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 CORO6Q6QEF8 472 aa3.48□□□□□ -1.85
HMGB1P37-201ENST00000439613 FAM180AQ6UWF9 173 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms