RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 MAGIXQ9H6Y5 334 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 TMEM100Q9NV29 134 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 VNN3Q9NY84 501 aa17.05■□□□□ 0.32
NCKIPSD-206ENST00000439518 CEACAM18A8MTB9 384 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 CCNB2O95067 398 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 FSTL3O95633 263 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 LCATP04180 440 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 WNT2P09544 360 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNF823P16415 610 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNF12P17014 697 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 OTX1P32242 354 aaPredicted RBP17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 TPTEP56180 551 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 PRSS12P56730 875 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 PPP1R8Q12972 351 aaKnown RBP17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNF181Q2M3W8 571 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 TUSC1Q2TAM9 212 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 MUC20Q8N307 709 aaPredicted RBP17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 LNX2Q8N448 690 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 SLC37A3Q8NCC5 494 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 PROKR2Q8NFJ6 384 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 DVL3Q92997 716 aaPredicted RBP17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 SLC6A7Q99884 636 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 TMEM165Q9HC07 324 aa17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 DDX28Q9NUL7 540 aaKnown RBP17.04■□□□□ 0.32
NCKIPSD-206ENST00000439518 IGHV3-64DA0A0J9YX35 117 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 TVP23AA6NH52 213 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 M0R135 149 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 HAX1O00165 279 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 CYB5R3P00387 301 aaPredicted RBP17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 HLA-DPB1P04440 258 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 PSKH1P11801 424 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 CPT2P23786 658 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 PMELP40967 661 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 RPS27P42677 84 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 MS4A2Q01362 244 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 MALLQ13021 153 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNF154Q13106 437 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 TRIM25Q14258 630 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 LYPD4Q6UWN0 246 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 MOGAT3Q86VF5 341 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 DHFR2Q86XF0 187 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 AQP11Q8NBQ7 271 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 FAM216AQ8WUB2 273 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 POP5Q969H6 163 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 SLCO4A1Q96BD0 722 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNF799Q96GE5 643 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 JMJD8Q96S16 334 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 RBM4Q9BWF3 364 aaKnown RBP17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 NMNAT2Q9BZQ4 307 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 TBC1D23Q9NUY8 699 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 INSIG2Q9Y5U4 225 aa17.03■□□□□ 0.32
NCKIPSD-206ENST00000439518 ZNF205O95201 554 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 T-ENOLP0DO92 83 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 GATA4P43694 442 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 MAB21L1Q13394 359 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 PCK2Q16822 640 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 MICAQ29983 383 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 ESCO2Q56NI9 601 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR2T5Q6IEZ7 315 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 PGAP1Q75T13 922 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 BPIFB2Q8N4F0 458 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 CELF2-AS1Q8N7Q2 184 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR51L1Q8NGJ5 315 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR9Q1Q8NGQ5 310 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR2T29Q8NH02 315 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 OR4Q3Q8NH05 313 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 SPTSSAQ969W0 71 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 TSSK6Q9BXA6 273 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 DGCR6LQ9BY27 220 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 LRCH1Q9Y2L9 728 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 COMMD3-BMI1R4GMX3 469 aa17.02■□□□□ 0.32
NCKIPSD-206ENST00000439518 LRRC30A6NM36 301 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 TRIM77I1YAP6 450 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 ANOS1P23352 680 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 FPR2P25090 351 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 PAX2Q02962 417 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 CRMP1Q14194 572 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 SNAI3Q3KNW1 292 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 C12orf54Q6X4T0 127 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 TMEM246Q9BRR3 403 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 REEP1Q9H902 201 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 ESM1Q9NQ30 184 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 BAIAP2Q9UQB8 552 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 SAMHD1Q9Y3Z3 626 aaKnown RBP17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 AUP1Q9Y679 476 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 U3KQV3 271 aa17.01■□□□□ 0.31
NCKIPSD-206ENST00000439518 C5orf63A6NC05 138 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 FAM107AO95990 144 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 CD200P41217 278 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 COMPP49747 757 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-206ENST00000439518 SLC25A1P53007 311 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 RAD23AP54725 363 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 ZNF92Q03936 586 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 ZNF404Q494X3 552 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 FAM98BQ52LJ0 330 aaKnown RBP17■□□□□ 0.31
NCKIPSD-206ENST00000439518 KLF17Q5JT82 389 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-206ENST00000439518 TEX30Q5JUR7 227 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 DRAM2Q6UX65 266 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 MRPL21Q7Z2W9 205 aaKnown RBP17■□□□□ 0.31
NCKIPSD-206ENST00000439518 DCXRQ7Z4W1 244 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms