RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 WDR76Q9H967 626 aa8.9□□□□□ -0.98
MCF2L-216ENST00000439475 NTN4Q9HB63 628 aa8.9□□□□□ -0.98
MCF2L-216ENST00000439475 SLC25A19Q9HC21 320 aa8.9□□□□□ -0.98
MCF2L-216ENST00000439475 KRT84Q9NSB2 600 aa8.9□□□□□ -0.98
MCF2L-216ENST00000439475 DDX28Q9NUL7 540 aaKnown RBP8.9□□□□□ -0.98
MCF2L-216ENST00000439475 TMEM100Q9NV29 134 aa8.9□□□□□ -0.98
MCF2L-216ENST00000439475 TVP23BQ9NYZ1 205 aa8.9□□□□□ -0.98
MCF2L-216ENST00000439475 H2AFY2Q9P0M6 372 aaPredicted RBP8.9□□□□□ -0.98
MCF2L-216ENST00000439475 C2CD3Q4AC94 2353 aa8.9□□□□□ -0.99
MCF2L-216ENST00000439475 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
MCF2L-216ENST00000439475 IQCF6A8MYZ5 107 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 IFNL4K9M1U5 179 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 PRODHO43272 600 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 SRP9P49458 86 aaKnown RBP8.89□□□□□ -0.99
MCF2L-216ENST00000439475 DAPP51397 102 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 PRKXP51817 358 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 MVKQ03426 396 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 DBPQ10586 325 aaPredicted RBP8.89□□□□□ -0.99
MCF2L-216ENST00000439475 PCK2Q16822 640 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 RSPO1Q2MKA7 263 aaPredicted RBP8.89□□□□□ -0.99
MCF2L-216ENST00000439475 KRTAP27-1Q3LI81 207 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 LINC01590Q5TEZ4 76 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 DPY19L4Q7Z388 723 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 CPOQ8IVL8 374 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 OR5AS1Q8N127 324 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 PARP8Q8N3A8 854 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 ZNF454Q8N9F8 522 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 CLDND2Q8NHS1 167 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 SPRYD4Q8WW59 207 aaPredicted RBP8.89□□□□□ -0.99
MCF2L-216ENST00000439475 POFUT1Q9H488 388 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 OPA3Q9H6K4 179 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 MED20Q9H944 212 aa8.89□□□□□ -0.99
MCF2L-216ENST00000439475 PNRC2Q9NPJ4 139 aaKnown RBP8.89□□□□□ -0.99
MCF2L-216ENST00000439475 GGT3PA6NGU5 568 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 XRCC2O43543 280 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 LYNP07948 512 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 H2BFMP0C1H6 154 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 DDOSTP39656 456 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 DVL1P1P54792 670 aaPredicted RBP8.88□□□□□ -0.99
MCF2L-216ENST00000439475 MZT1Q08AG7 82 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 CCNIQ14094 377 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 GK2Q14410 553 aaPredicted RBP8.88□□□□□ -0.99
MCF2L-216ENST00000439475 HLXQ14774 488 aaPredicted RBP8.88□□□□□ -0.99
MCF2L-216ENST00000439475 PTGES3Q15185 160 aaKnown RBP8.88□□□□□ -0.99
MCF2L-216ENST00000439475 LCN1P1Q5VSP4 162 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 TMEM236Q5W0B7 351 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 FAHD1Q6P587 224 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 LYPD4Q6UWN0 246 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 ASRGL1Q7L266 308 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 CXXC5Q7LFL8 322 aaKnown RBP8.88□□□□□ -0.99
MCF2L-216ENST00000439475 AMIGO2Q86SJ2 522 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 NAA40Q86UY6 237 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 GLCCI1Q86VQ1 547 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 THEM6Q8WUY1 208 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 LRTOMTQ8WZ04 291 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 GTF3AQ92664 365 aaKnown RBP8.88□□□□□ -0.99
MCF2L-216ENST00000439475 CENPNQ96H22 339 aaPredicted RBP8.88□□□□□ -0.99
MCF2L-216ENST00000439475 C1orf159Q96HA4 380 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 OR2V2Q96R30 315 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 GAL3ST1Q99999 423 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 ABHD6Q9BV23 337 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 OSBPL10Q9BXB5 764 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 NARFLQ9H6Q4 476 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 MARCH7Q9H992 704 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 TREM2Q9NZC2 230 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 PCDHB10Q9UN67 800 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 PPP1R3CQ9UQK1 317 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 WIPI2Q9Y4P8 454 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 N6AMT1Q9Y5N5 214 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 NPTNQ9Y639 398 aa8.88□□□□□ -0.99
MCF2L-216ENST00000439475 DYSFO75923 2080 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 ISPDA4D126 451 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 ANXA2P07355 339 aaKnown RBP8.87□□□□□ -0.99
MCF2L-216ENST00000439475 FAM157CP0CG43 387 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 IRF2P14316 349 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 CFL1P23528 166 aaKnown RBP8.87□□□□□ -0.99
MCF2L-216ENST00000439475 OTX1P32242 354 aaPredicted RBP8.87□□□□□ -0.99
MCF2L-216ENST00000439475 SNCBQ16143 134 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 TMEM255AQ5JRV8 349 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 AVPI1Q5T686 147 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 ZFP1Q6P2D0 407 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 KCTD18Q6PI47 426 aaPredicted RBP8.87□□□□□ -0.99
MCF2L-216ENST00000439475 Q6ZR03 302 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 TIGD4Q8IY51 512 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 C1orf87Q8N0U7 546 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 TEX29Q8N6K0 151 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 SPERTQ8NA61 448 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 BHLHE23Q8NDY6 225 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 OR52H1Q8NGJ2 320 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 OR10S1Q8NGN2 331 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 OR51F2Q8NH61 342 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 ST7LQ8TDW4 575 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 ITLN1Q8WWA0 313 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 ERGIC1Q969X5 290 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 ZMYND19Q96E35 227 aaPredicted RBP8.87□□□□□ -0.99
MCF2L-216ENST00000439475 RAB3IPQ96QF0 476 aaPredicted RBP8.87□□□□□ -0.99
MCF2L-216ENST00000439475 SLC30A2Q9BRI3 323 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 NIPAL2Q9H841 368 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 TMEM106BQ9NUM4 274 aa8.87□□□□□ -0.99
MCF2L-216ENST00000439475 TMEFF2Q9UIK5 374 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms