RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 TNK1Q13470 666 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 FAM74A1Q5RGS3 127 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 CSNK2A3Q8NEV1 391 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 C2CD4CQ8TF44 421 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 HAVCR1Q96D42 359 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 RADILQ96JH8 1075 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ATF6BQ99941 703 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 ST6GALNAC5Q9BVH7 336 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 FAM117AQ9C073 453 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 C12orf49Q9H741 205 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 TAS2R4Q9NYW5 299 aa10.38□□□□□ -0.75
TRAPPC9-202ENST00000438773 hCG_1807616A0A1W2PRN6 198 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 SLC22A23A1A5C7 686 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 IFITM5A6NNB3 132 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 TGFBR3LH3BV60 316 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 DHHO43323 396 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 TIAF1O95411 115 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ABHD16AO95870 558 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 FAM157BP0CG42 384 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 AKAIN1P0CW23 69 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 FCGR2AP12318 317 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 CX3CR1P49238 355 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 SLC25A35Q3KQZ1 300 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 LIX1LQ8IVB5 337 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 SLC22A24Q8N4F4 322 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF565Q8N9K5 539 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR11G2Q8NGC1 345 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR5H2Q8NGV7 314 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 PPA2Q9H2U2 334 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 KCNN3Q9UGI6 736 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 IFI6P09912 130 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF250P15622 560 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 GABRR1P24046 479 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 CLDN6P56747 220 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 CLDN20P56880 219 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 IGLV3-21P80748 117 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ETFDHQ16134 617 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 SLC36A2Q495M3 483 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 FIP1L1Q6UN15 594 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 DND1Q8IYX4 353 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF649Q9BS31 505 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 TMEM59Q9BXS4 323 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 SELENOIQ9C0D9 397 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF436Q9C0F3 470 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 CHRNA10Q9GZZ6 450 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 GDF2Q9UK05 429 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 MRPS28Q9Y2Q9 187 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 A0A1B0GTH9 108 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 M0QYG6 137 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 FADS1O60427 444 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 RBMXP38159 391 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 PPIAP62937 165 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 HACD4Q5VWC8 232 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 PLCXD3Q63HM9 321 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 APH1AQ96BI3 265 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF285Q96NJ3 590 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 WDR54Q9H977 334 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF223Q9UK11 482 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 MEMO1Q9Y316 297 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ETV7Q9Y603 341 aa10.37□□□□□ -0.75
TRAPPC9-202ENST00000438773 ARPC4-TTLL3A0A0A6YYG9 625 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 AIPO00170 330 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 PTP4A3O75365 173 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 PEX14O75381 377 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 EPPINO95925 133 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 GLI4P10075 376 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 EPXP11678 715 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 RPS4Y1P22090 263 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 S100A2P29034 98 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 GAS1P54826 345 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 CNN3Q15417 329 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 STAC2Q6ZMT1 411 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 MOB3CQ70IA8 216 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 C9orf62Q8N4C0 152 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 RBPMSQ93062 196 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ALKBH3Q96Q83 286 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 SPACA5Q96QH8 159 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 PAPOLGQ9BWT3 736 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 AUNIPQ9H7T9 357 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 HAO2Q9NYQ3 351 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 SH3BGRL2Q9UJC5 107 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 MDC1Q14676 2089 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 B8ZZF3 427 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 TSPAN2O60636 221 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 DBHP09172 617 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 NFYAP23511 347 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 EXOSC2Q13868 293 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR1C1Q15619 314 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 NR2C2APQ86WQ0 139 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ANGPTL5Q86XS5 388 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR10K1Q8NGX5 313 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 DCUN1D4Q92564 292 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 DHRS9Q9BPW9 319 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 GSX2Q9BZM3 304 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 R4GMQ9 66 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 LOC100289279A0A1B0GTE1 492 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 OR2M5A3KFT3 312 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 ZNF814B7Z6K7 855 aa10.36□□□□□ -0.75
TRAPPC9-202ENST00000438773 IGHA1P01876 353 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms