RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 GGTLC2Q14390 218 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 NKAIN1Q4KMZ8 207 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 TMEM128Q5BJH2 165 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF709Q8N972 641 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 HSD17B11Q8NBQ5 300 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 OR5M9Q8NGP3 310 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 STT3BQ8TCJ2 826 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 PIGCQ92535 297 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 EMG1Q92979 244 aaKnown RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF775Q96BV0 537 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 SLC25A31Q9H0C2 315 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 C12orf10Q9HB07 376 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 CA10Q9NS85 328 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 PCDHB10Q9UN67 800 aa6.02□□□□□ -1.45
CSDE1-205ENST00000438362 PTRH2Q9Y3E5 179 aaKnown RBP6.02□□□□□ -1.45
CSDE1-205ENST00000438362 KLF4O43474 513 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 JTBO76095 146 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TBX6O95947 436 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TK1P04183 234 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 QDPRP09417 244 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TUBG1P23258 451 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 PPP1R1AQ13522 171 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 SMUG1Q53HV7 270 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 MESTQ5EB52 335 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 PLCXD3Q63HM9 321 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 OGFOD3Q6PK18 319 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 DEGS2Q6QHC5 323 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 FIP1L1Q6UN15 594 aaKnown RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 UQCC3Q6UW78 93 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 ARRDC1Q8N5I2 433 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 OR5M8Q8NGP6 311 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 OR6K3Q8NGY3 331 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 FAM213BQ8TBF2 198 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 GPR119Q8TDV5 335 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 C11orf40Q8WZ69 217 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 GABRG3Q99928 467 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 KLHL13Q9P2N7 655 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 PCDHGA1Q9Y5H4 931 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 A0A1W2PNR3 127 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TCRBV16S1A1N1A0A5B0 115 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 ALG1L2C9J202 215 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 NRG2O14511 850 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 EIF1BO60739 113 aaKnown RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TMIGD3P0DMS9 266 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 CD96P40200 585 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 HTR5AP47898 357 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF133P52736 654 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 PCK2Q16822 640 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 SOHLH1Q5JUK2 328 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TMEM164Q5U3C3 297 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 GPR157Q5UAW9 335 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 MOB3CQ70IA8 216 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 MRPL21Q7Z2W9 205 aaKnown RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 ARHGEF39Q8N4T4 335 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 BVESQ8NE79 360 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 OR1S1Q8NH92 325 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 ZPLD1Q8TCW7 415 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TM4SF19Q96DZ7 209 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 C2orf50Q96LR7 162 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 OR6C1Q96RD1 312 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 LRRC61Q9BV99 259 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TMPRSS13Q9BYE2 586 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 KCNK15Q9H427 330 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 SLC22A11Q9NSA0 550 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF175Q9Y473 711 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 PUS1Q9Y606 427 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 KPTNQ9Y664 436 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 KNTC1P50748 2209 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 RPS10-NUDT3A0A1W2PQS6 291 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 BCAT2O15382 392 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 CFDP00746 253 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 CT45A8P0DMV1 189 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 CT45A9P0DMV2 189 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 S100PP25815 95 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 ABCD3P28288 659 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 RPS10P46783 165 aaKnown RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 FMODQ06828 376 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 SRSF5Q13243 272 aaKnown RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF674Q2M3X9 581 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 CT45A2Q5DJT8 189 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 FAM199XQ6PEV8 388 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 BEND4Q6ZU67 534 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 GLYATL2Q8WU03 294 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 OIT3Q8WWZ8 545 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 CMBLQ96DG6 245 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 PHYHIPLQ96FC7 376 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 B4GALT7Q9UBV7 327 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 NDRG3Q9UGV2 375 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 KCNE5Q9UJ90 142 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 GDF2Q9UK05 429 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 PIGLQ9Y2B2 252 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 TMEM184BQ9Y519 407 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-205ENST00000438362 PCDHGA5Q9Y5G8 931 aa6.01□□□□□ -1.45
CSDE1-205ENST00000438362 K7EQS6 105 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 LINC01565O15544 149 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 THY1P04216 161 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 EPHA1P21709 976 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 MSR1P21757 451 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 OTX2P32243 289 aa6□□□□□ -1.45
CSDE1-205ENST00000438362 KIR2DL1P43626 348 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms