RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 FZD9O00144 591 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 OR2J3O76001 311 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 BSGP35613 385 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 OR8B8Q15620 311 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 SYPL1Q16563 259 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 TRMT12Q53H54 448 aaKnown RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 TMEM268Q5VZI3 342 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 TEX101Q9BY14 249 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 TMEM265A0A087WTH1 108 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 FAM74A7A6NL05 159 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 EN2P19622 333 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 NLGN4XQ8N0W4 816 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 PELI3Q8N2H9 469 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 LHFPL5Q8TAF8 219 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 KCNE4Q8WWG9 221 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 MCHR2Q969V1 340 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 EGLN2Q96KS0 407 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 TNFRSF13CQ96RJ3 184 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 IL17CQ9P0M4 197 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 CLEC2DQ9UHP7 191 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 TMED3Q9Y3Q3 217 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 GPX2P18283 190 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 SLC25A43Q8WUT9 341 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 BCL7CQ8WUZ0 217 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 EDARADDQ8WWZ3 215 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 WDR89Q96FK6 387 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 WDR83Q9BRX9 315 aaKnown RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 MIOXQ9UGB7 285 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 AHCTF1Q8WYP5 2266 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 HRH1P35367 487 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 PIGPP57054 158 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 REC114Q7Z4M0 266 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 GPR137Q96N19 417 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 FAM234AQ9H0X4 552 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 DUSP21Q9H596 190 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF840PA6NDX5 716 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 OR2W3Q7Z3T1 314 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 MAML2Q8IZL2 1156 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 NEIL1Q96FI4 390 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 LRRC3BQ96PB8 259 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 S1PR3Q99500 378 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 SMDT1Q9H4I9 107 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 SLC45A2Q9UMX9 530 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 SLC5A6Q9Y289 635 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 CLDN17P56750 224 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 DHRS7BQ6IAN0 325 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-209ENST00000437951 OR5AU1Q8NGC0 362 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 OR5D13Q8NGL4 314 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 COPS9Q8WXC6 57 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 RAB40CQ96S21 281 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 AP5S1Q9NUS5 200 aa10.54□□□□□ -0.72
PTCH1-209ENST00000437951 MEIKINA0A087WXM9 373 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CLEC18AA5D8T8 446 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CLEC2LP0C7M8 214 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 BMP5P22003 454 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 GDF1P27539 372 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CLEC18CQ8NCF0 446 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 TMEM37Q8WXS4 190 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 RIMBP3CA6NJZ7 1639 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 RIMBP3BA6NNM3 1639 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 RIMBP3Q9UFD9 1639 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 FPR2P25090 351 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CTF1Q16619 201 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 MRM1Q6IN84 353 aaKnown RBP10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CCDC190Q86UF4 302 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 ATP5SQ99766 215 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CSNK1G1Q9HCP0 422 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 LPAR3Q9UBY5 353 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 FOXJ3Q9UPW0 622 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 DOCK7Q96N67 2140 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 OR2T8A6NH00 312 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 NXPH3O95157 252 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 LGALS4P56470 323 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 MEX3DQ86XN8 651 aaKnown RBP10.53□□□□□ -0.72
PTCH1-209ENST00000437951 NUDCD2Q8WVJ2 157 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 ADGRL4Q9HBW9 690 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 RALGAPA1Q6GYQ0 2036 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 ZAR1LA6NP61 321 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 OR5G3P0C626 314 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 TMEM11P17152 192 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CLEC14AQ86T13 490 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CNEP1R1Q8N9A8 125 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 WDFY2Q96P53 400 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 PLA2G12AQ9BZM1 189 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 TRBV11-1A0A0K0K1C0 115 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 AAED1Q7RTV5 226 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 DCXRQ7Z4W1 244 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 ERGIC1Q969X5 290 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 OPALINQ96PE5 141 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 RNF2Q99496 336 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 CHST6Q9GZX3 395 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 VCX2Q9H322 139 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 MMP24Q9Y5R2 645 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 FAM87AP0C7U9 286 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 BTF3P20290 206 aaKnown RBP10.53□□□□□ -0.72
PTCH1-209ENST00000437951 TEAD1P28347 426 aa10.53□□□□□ -0.72
PTCH1-209ENST00000437951 RTL10Q7L3V2 364 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms